Gene PHATRDRAFT_28482 details

Gene Information

• Locus tag: PHATRDRAFT_28482
• ID: 7202166
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 368268
• End bp: 370470
• Gene Length: 2203 bp
• Protein Length: 602 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002181194
• Protein GI: 219121689

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.962764
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAAACACCC ACTACAAACA CTCGAGACAA TCCGGAGATA CTTCCATATA CTCTAGAAGC 
AATAGAGCAA GACTTACAGT AAAGCAATCA TCACATAGAC TACATCTGCG TCGCGACCGA 
AAAGACGGAC ATTGCACGTC GTCGAAAAGG GTTATTGACG TCGTTTGGGG GAAAGTGATC 
GCCTTTCGAT TCTTATACCA CTGGGGATCA TGGAAGATAT CATGTCCATA ACTCCGCTGG 
GGTCGGGCCA AGAAGTCGGA CGTTCCTGCC ACCTGCTTGA ATTTCGCGGA ATGACAATTC 
TCTTGGACTG CGGCATTCAT CCTGGGTACG ATGGGTTGAA TGGACTCCCT TATCTCGATC 
GAATTGAGCC TGATCAGGTT GACGTCTTGC TCATCACCCA CTTTCATCTA GATCACGTCG 
CTTCGTTACC CTATTTGACC GAACGAACTT CCTTTAAAGG CCGCATCTTT ATGACTCATC 
CTACCAAGGC GGTGACGCGA TTGCTTCTTG GGGATTATCT CCGACTCTTG CAAATGAAAA 
ACGCCAAACC CGAAGACGTA CTGTACACGG AAGCCGATCT TCAGTCTTGC ATCGATAAGA 
TCGAGCTCAT GGATTTTCAT ACCACAGTCA CGGTCGGCGG TTTGTCATTT TACGCGTTGA 
ATGCCGGCCA CGTGCTCGGT GCTTGCATGT TCTTTCTCAG TCTCGGTGGA CGCAAAATAT 
TGTACACGGG CGACTACTCC ATGGAAGATG ATCGCCACTT GATGGCGGCC GAAATTCCTG 
CCGAGTCCCC CGACGTGCTG ATTGTAGAGG CCACGTACGG TGTGCAAGTA CACGCGAGTC 
GCGCCGAGCG CGAAGCCCGC TTTACCGGAA CCATCGAACG AGTCATATCG CGCGGCGGCA 
GATGCCTCAT ACCAGTCTTT GCACTGGGGC GAGCCCAGGA ATTGTTGCTC ATTCTGGACG 
AGTACTGGCA GGCAAATCCG CATTTGCAAA ACATTCCCAT TTGGTACGCT AGTAAGCTGG 
CTTCTCGGGC ACTACGTGTC TATCAAACGT ACGCGAATAT GATGAACGCA CGGATACGCT 
CCCAAATGGA CGTGTCCAAT CCTTTCCGAT TTCGTTTCAT TCAAAATCTC AAATCCATTG 
ACGTCAATTC GTTTGACGAC TCCGGTCCTT CGGTCGTTTT TGCCTCTCCA GGGATGTTGC 
AGTCTGGAGT TTCGCGGCAG CTATTTGATC GCTGGGCGTC GGATCACAAG AATGGTGTGT 
TGATTGCCGG TTACGCTGTT GAGCACACAC TTGCCAAAGA AATCATGGCG CAACCCAAAG 
AAGTTGTTAC ACTGGAAGGT CGTCGACAAC CGTTAAATGC CCTAGTGGAC TACGTCAGTT 
TCTCGGCGCA CGTTGATTTT GTACAAAACC GCTCTTTTAT CAATCAAGTG GCGCCGAAAC 
ACATTATTCT CGTACATGGA CAGAAGGATG AAATGGGACG ACTCAAGAGT GCTTTACTGC 
TACAGTATAA GCAGTTTCCG GAGGTAAGCG CTTTCCGTAA AGAAGAACTT TGTCGTATTT 
GCGTTGTTTA GCCACTCACA ATCTCTGATT TCGGTTGTTG CCGGCAAATC GTGTCTTAGA 
ATAAACGTCC AACGATTACC ATGCCACCGA ATTTACAGGA AGTCAAACTT AAATTTGCAC 
GTCGGCGATC GGCCAAGGTC ATGGGATCGT TAGCAGATCG ACAAAAAGAG CCTAAAGAAG 
GGGAAGAAGT CCGGGGTATT CTTGTCACGC ATAACTTTCA TTCGAAATTG GTTGCTCCCG 
AAGACTTAGC CACCTACACT CCCTTGCGAG TCGGCTCGAT CGCCAGTAAG CTGCACGTTC 
CATTTGTTGG ATCTCTTGCG ACTTTGCGAT TATTTTTGAC GGAAATGTTT GCTGGGGTAT 
CGGAAAGTAC GGAAGAATCA GAGGACTCGA CGCGGACCAT TTTCCAACTT GTGAACGAGG 
TGTGTAAACT GAGCGTTCGT TGAAAACGAT TAATGCGCGG TCCAAGTCGT CATATATCTC 
AGTCTCTCAC ACTTTTCAAT GCACTCTATT TCCATCATAA TCGCAGGTTA AAGTCACGTT 
AGGTGCGAAC AAGGGAGTAG CGATTGTCGA ATGGATGGCA AGTCCCCAAG GTGATATTTT 
GGCTGATGCT GTTGTCGCGC TGTTAATGCA CGCGCAGAGC AGT 

 

Protein sequence

MEDIMSITPL GSGQEVGRSC HLLEFRGMTI LLDCGIHPGY DGLNGLPYLD RIEPDQVDVL 
LITHFHLDHV ASLPYLTERT SFKGRIFMTH PTKAVTRLLL GDYLRLLQMK NAKPEDVLYT 
EADLQSCIDK IELMDFHTTV TVGGLSFYAL NAGHVLGACM FFLSLGGRKI LYTGDYSMED 
DRHLMAAEIP AESPDVLIVE ATYGVQVHAS RAEREARFTG TIERVISRGG RCLIPVFALG 
RAQELLLILD EYWQANPHLQ NIPIWYASKL ASRALRVYQT YANMMNARIR SQMDVSNPFR 
FRFIQNLKSI DVNSFDDSGP SVVFASPGML QSGVSRQLFD RWASDHKNGV LIAGYAVEHT 
LAKEIMAQPK EVVTLEGRRQ PLNALVDYVS FSAHVDFVQN RSFINQVAPK HIILVHGQKD 
EMGRLKSALL LQYKQFPENK RPTITMPPNL QEVKLKFARR RSAKVMGSLA DRQKEPKEGE 
EVRGILVTHN FHSKLVAPED LATYTPLRVG SIASKLHVPF VGSLATLRLF LTEMFAGVSE 
STEESEDSTR TIFQLVNEVC KLSVKVTLGA NKGVAIVEWM ASPQGDILAD AVVALLMHAQ 
SS