| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46954 |
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| Symbol | |
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| ID | 7204770 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 915814 |
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| End bp | 918346 |
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| Gene Length | 2533 bp |
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| Protein Length | 720 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185808 |
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| Protein GI | 219121157 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0187117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCAACGGAGA CGGAGACAGA AGTTCTTTAC GGAGAGCAAC GGAAGCTTTG ACGCGCAAAA
GGCAGTGCGG CGTGGTGGCG GTAACGGCGA CGGAAGTGCG GTTTTGGGTT TCCCTGTGTT
GCAACGAAGA CGGAGACGGA AGTACAGTTT TGGGGTTCCG GGGCGACAGT GATTGCAACA
ATGGCATCTT CCCTTGCAAA ATTTACAGAT GCATTGTCCC AGCTCCTAAC AACGGAGTCA
TTGCAAAAGG CAATTGATGA ATTGAAAAAT GACCTTCAAT CTTGGGATGC TCTAATTGCT
TTTCCAGTTG TTCTTCCAGT ATTACCTGGT ATGCCAGCAA CACTCTCCTA TTGCAACAAC
CTTCTGGAGT ACACAAAATC AAAGTACAAA GGCCAGAAAG TATACTTTTG CCAGAGCAAA
TACCCTTTAC ATGATGGCTG GGAAGTATTG AAGAATGATC TTGAAAGTGC AGCACTAGAG
CAAGGATCCG CAATCATTTC AAATGGTGGT GGCACCGGCA ATGCCCGGAA CAGTAAAAAG
TTGATATGTA AATGTGGTCG AGTCTACCAA AGAGGGCTGA CAGACAAGGA TAAAGTGAAA
ACCTTCCGAA ATGGCTCCCT CCACAGTGAC AGAAAAAATT CCCGAGGGCC TAATGGCAAG
AGAATGCCAA GAAGAACAAG CAGCATGCGT CCAGACAATG CAAATTCTGT TTGTCGTATG
AGTTTTACTA TCAAATGGGA CAAAAACGGT TATTACTTGT ATTGCGGATA CGGGAACATC
AAACACACCA ACCATGTCAA GCTGGCAGGA AAGCATATGA CATTTCCAAA GCGTCTTGTA
GCAGATGCGG AACGGGATGT TGTTGAGTCT ATTGGTGCTG CAAAAGCACT TCATGCTGTG
GCTCGCAATG TCCACTTTCA AAGAACAGGA CGCCTCTTGA GCCATTCACA AGTTCGCTAC
ATGCACAACA TGGCAGAGAA GATTACCATG GCATTGTTGG TGGATGGAAG TTCGATCAAC
ATTGATGCCT TAAGTGATTC TGAGCGAATG TTTGAACATT TTAAGTTGCA CGGAGTGAAC
TATTCACTGC TGTACAACCA TGTGCCAACA GAGTTGGCAA GTAACAGCAC AAGTACTAGT
TGTCAGGCTA CGGTGGATAA CAACTCCTTG ACTTCTTGTT TGCTGGGTAT GACAGATGGT
GAGTCTGTGT CACTCACAAG TCCAAGCTCT TTAGTTAGCG AGACCCACAA TGTAAATGAT
TGGTTGGGTT CATCAACAGC AGTGAAGCTT CCCCCAAAAG AAAATGAGGA TATGCTTAGA
TTTGCCAATG AACACCGAGA TTCATACAAG CTTGAAAACA GCCAGAAGCT AATGATTGGA
TGTGCTTGGA TTCATCCAAA AGAAAAGCGC CTATTCCAAT TGTTTCCAGA AGTTGTTCAT
GTGGATTCCA CTGCAGATAC AAACAAGGAA GGCCGTCCTC TTTTGACAAT GACAGGCCGT
GATTCAAGTG GAAAGCACTT CACTATACTT CGTGTGTTCC TTCCAAATGA GCGAGCTTTT
GTTTTCCGTT GGTTATTCCG TCTTGTTCTG CCCTCACTTC TTGGGACAAA ATGGACAAAG
AGAATAAAGG TCATTATAAC AGATGGAGAT TCACAAGAGA CCTCCCAGCT TGACATTGCC
ATAGCTTTGC TGTTTCCTGA TGTTCTTCGA GTCCGATGTG GTTGGCATAT TGTTGATCGA
GGCTGGAAAA GAAAATGCCC AGGTAACTTG TGGTCAAAGC AGACTTGTGT TGCATTGTAT
TTCTGTCTAC TGCTTTCTTA TAATTGCTCT TTTCTATGCA AAACATAGGG TATCAGTTGG
TAGATGTATG TAACAGAAAT AAATTTGAGG TAGTCACTAA GATTATCAAG AGTTGGCTGT
ATTCATGGAT GCAGCCATGG CAGTGTGAGA CAGAGAAGGA GTACAATATC TCCAAGTCCC
TTTTGTTTGC ATACATGCAG TCATTGGAAG TTGTGTCTGT CATGGGTCAA CAAAATGCAT
CAAGGATCTT CCAATTTATC CGAGAGAACG TTGAACCACA CGAATCACAT TACTGTTTTC
ACAAGCGTAA GACTGTTCGA CACTATGACA CATTTGTGAA CTCAGCTCAT GAGGGCACAA
ACAATGGCTT AAAGAATTCT GCTGCTCCTG TGTTGCCACA GTACACCATT GACCAATCTG
CGTCAGTGCT CACTAAGAAT GCCAGTGTCA ATACATTGGC TAAAGAGCTT GCTGCTGGCC
AACAAAGTAT TCGTCACAAA CTTTGGTCAG ACCTGCCAAC TTCCAAGCAT CTAAATACTT
TGGGTGAATC TCTAATTGTT AAAGAGTGGA AACTACATAA AGCCTACGGC CTTGAACGTG
TGGCACTTGA CACCTTCCAT GTGAAACATT GCAACCCAAA ACCAGTAATG GTGAAGCAAA
GTGCCCCCAT CCCCCTCTTT CAGCGGGTAC GTCTTGTAAA AATCTGTAGG CGGCGGCTCT
ATTGCTCTTG TGA
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| Protein sequence | MASSLAKFTD ALSQLLTTES LQKAIDELKN DLQSWDALIA FPVVLPVLPG MPATLSYCNN
LLEYTKSKYK GQKVYFCQSK YPLHDGWEVL KNDLESAALE QGSAIISNGG GTGNARNSKK
LICKCGRVYQ RGLTDKDKVK TFRNGSLHSD RKNSRGPNGK RMPRRTSSMR PDNANSVCRM
SFTIKWDKNG YYLYCGYGNI KHTNHVKLAG KHMTFPKRLV ADAERDVVES IGAAKALHAV
ARNVHFQRTG RLLSHSQVRY MHNMAEKITM ALLVDGSSIN IDALSDSERM FEHFKLHGVN
YSLLYNHVPT ELASNSTSTS CQATVDNNSL TSCLLGMTDA VKLPPKENED MLRFANEHRD
SYKLENSQKL MIGCAWIHPK EKRLFQLFPE VVHVDSTADT NKEGRPLLTM TGRDSSGKHF
TILRVFLPNE RAFVFRWLFR LVLPSLLGTK WTKRIKVIIT DGDSQETSQL DIAIALLFPD
VLRVRCGWHI VDRGWKRKCP GYQLVDVCNR NKFEVVTKII KSWLYSWMQP WQCETEKEYN
ISKSLLFAYM QSLEVVSVMG QQNASRIFQF IRENVEPHES HYCFHKRKTV RHYDTFVNSA
HEGTNNGLKN SAAPVLPQYT IDQSASVLTK NASVNTLAKE LAAGQQSIRH KLWSDLPTSK
HLNTLGESLI VKEWKLHKAY GLERVALDTF HVKHCNPKPV MVKQSAPIPL FQRAAALLLL
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