Gene PHATR_46903 details

Gene Information

• Locus tag: PHATR_46903
• ID: 7204445
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: -
• Start bp: 757373
• End bp: 759600
• Gene Length: 2228 bp
• Protein Length: 682 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002185946
• Protein GI: 219121444

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCCT TTGCAACGTT AGAGTCTGCC TCCCGGAATC TATGGACTAG ATCCACGGTC 
TCGCGTACAG ATGGTGTATT GCGTAGACGT TCGACTCGGT CGACTCTGGC GAGGCTGTCT 
TCCCTACCGC ATGGGTCTGG TGCAACGGAG CATCGGCCGC CTCCGAAATG GCTTGTCAAT 
CGGCGAAAAG TGAACAGGCA AACTTGGTCG TCGGCTTGGC AAGCGTTTTC GTCGGCTGCC 
CAACCCACTG ATTCAGACGA TGTCAATTTA TCAAAAGACT CCGACTCTGC ACTGAAGACG 
CCGATAGATT TTAGCAAGGA AGACGAGCAC GTCGAAGAGC GCAAACGCAA GCGGCTTTCT 
GAGGTAAGGC CCAGTGTCAC CGTGTGCAGA TGGACATTTA CGCTTGAAGA AGGCTACTGT 
CATTTTCACT ATTGAACTCA CCGGAATAGC TAATCGCCAC CGTGTCATTT CAAACATGCT 
TTCTCACTCT ACTACTCCCC TGCTCGGACC CAAGGTACGC ATTTCTGAGG TGCTTCAAGC 
AAAACACTCT TATCGCTGGG TGGATCCAGT TATTCCCCGA ACTGCAACAG TTCAAGAAGC 
GATTGTCACT ACGATTGAAG GTGGTTTGTC GGGTGCCATG GTCCTCGAAG ACGAGCACCA 
CAATCGAGTC TGCGGTCTCA TTACCTCCCG CGATTTACTC CGCATCATGG CTTCAGGAGT 
CAAGGAAGGA GACACCCCGG AAGAAATCAT GAACCGGTTG GTGGGTGATT ATATGACGCC 
CATTTCGCAA GTTGTTTATG GTCGTCCCGA CGAAACGGTT GGCATGTGTC GAACAATCAT 
GGCCAGACTG GGCATTAAAT GCTTGCCAAT CTTATCACGT GAGGGTCGGG TGGAAGGACT 
CGTGACGGCA AGAGACATGT CCGATTTTGG ACTTTCGGCT AAAGATCGGG GTGGCAAGAA 
ATCGTACCTA AATGATGTTT CTGAACGTGT CGGCTTGAGC AGTAACACCA GTATGGCGGA 
ACCACCAATT TACCTGAAAG CACAGTTGGC ATTGGGACCC ACACCTCTGT TTATCAATGT 
AGGCGTCGCC GAATTGCCGC ATCCATTTAA AACAGCAGAT GGTGGTCTCG TTCAAGGAAT 
GCGAGGTAAG TCCTTTTCCG GTAAACGACA CAGTCCACCC GAATGAATCC AGACCTAACA 
GGGTTTACTC CAACCCAGAC CTTGGATTTA ACGATCTATC TACGGATCCC ACTTTGTCGG 
AAGACTCATG TTTTGTCACT AACGTCAAAC TGCCGGATGG AAAGAAAAAG ACATTGCGTG 
ACTTTACGTA CATGGGAGTT GCCGACGGTG TTGGAAGTTG GCGTGAGTAC GGCGTAGATC 
CGCGACTTTT TGCAAGAAGA CTGATGGAGG AATGTGAAAA TATCCTTCTT GAGGCACAGC 
GAAACGGTCA AATGGACGGC AATAACTTTC GACAAGTCAC GGCCCCCTCC GATATTATGG 
CACAAGCATT CGAACGGGTG AAGGCGGAAA ATGTCATTGG ATCAAGTACA GCCTGCATAG 
GAGTCTTTGA TCAGATTCGG CATCAGCTCC ACTTTAGCAA CTTGGGCGAT TCTGGGATCA 
TTGTTCTGCG CCACATTGAT TCGGATGTGG CGGGTTCGTT GAAGCGTGAT CGGGTGACAC 
CGAGGACCGA AAGAACGTCT GATATAAGGG TAGCTTTTGT AAGTCAGCAG CAACTGAAAT 
CCTTCAACCA TCCATTTCAA ATTGGCTGGA CGGGCGAGGA ACTGAAAGAA GGGGAAAGCT 
CATCCTTTCG GAACGCAGGC GAATCGTGTA CATCTTCCAT TCATTTACGA CGTGGCGATG 
TTGTTATTAT GGCGACGGAT GGTTTATTCG ACAACGTGGA GTTGGACGAC ATTTGTACCA 
TGGTGCTGGA GTGGGAGCAG CAGAATGGTT TTGTCCGTGC TGGCGATACC CAGGCTCGCG 
AAAAGCGATG GCAGATGGGC AATTCGTTGA CTCTTTTGTC AGCTGGCCGA ATAAATGATT 
TGGCCCAGCG ACTGGTTAAG AAAGCTCGTG AAAATTCCTT GGACTCGTCC CTGGATTCTC 
CTTTTGCCAT TCTGGCAAAG GAAAATGACA TTATGTGGTC AGGTGGAATG CCAGACGATT 
GCATTGTGAT TGCAATGCAT GTTGTAGGAC GAGACGCGAA CGATACAATG GACTCCACAA 
AGATGTAA 

 

Protein sequence

MAAFATLESA SRNLWTRSTV SRTDGVLRRR STRSTLARLS SLPHGSGATE HRPPPKWLVN 
RRKVNRQTWS SAWQAFSSAA QPTDSDDVNL SKDSDSALKT PIDFSKEDEH VEERKRKRLS 
EVRISEVLQA KHSYRWVDPV IPRTATVQEA IVTTIEGGLS GAMVLEDEHH NRVCGLITSR 
DLLRIMASGV KEGDTPEEIM NRLVGDYMTP ISQVVYGRPD ETVGMCRTIM ARLGIKCLPI 
LSREGRVEGL VTARDMSDFG LSAKDRGGKK SYLNDVSERV GLSSNTSMAE PPIYLKAQLA 
LGPTPLFINV GVAELPHPFK TADGGLVQGM RVHPNESRPN RVYSNPDLGF NDLSTDPTLS 
EDSCFVTNVK LPDGKKKTLR DFTYMGVADG VGSWREYGVD PRLFARRLME ECENILLEAQ 
RNGQMDGNNF RQVTAPSDIM AQAFERVKAE NVIGSSTACI GVFDQIRHQL HFSNLGDSGI 
IVLRHIDSDV AGSLKRDRVT PRTERTSDIR VAFVSQQQLK SFNHPFQIGW TGEELKEGES 
SSFRNAGESC TSSIHLRRGD VVIMATDGLF DNVELDDICT MVLEWEQQNG FVRAGDTQAR 
EKRWQMGNSL TLLSAGRIND LAQRLVKKAR ENSLDSSLDS PFAILAKEND IMWSGGMPDD 
CIVIAMHVVG RDANDTMDST KM