Gene PHATR_46896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46896 
Symbol 
ID7204733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp740625 
End bp741611 
Gene Length987 bp 
Protein Length321 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185943 
Protein GI219121438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAAACCGAA AACAAAACAC CATGGGCTTT GGTCCCGGCT TTTCCCAACT TTTTCTCTTG 
TTATTATTCC AGACGGCGCA AAGTTGGTTG TCTTCTTCCA AGTTGTATGG TCCGACTGAA
TCAATACAGA GAGCGTCGAC TCCGTCATTT TCATCGAGCA TTGTAAATTC TCGGTTGTTC
GGCGTGTCCA CTTCGGTTCC CGGTATCGCA ACCGACATTC CACGGCTGGA GCCTCGACAC
CTACGAGAGC TTTCGGAGAA TCAGTACGTC GTAATTTGTG ACTTTTTGCC GGAGTCGTTA
CAAACCGCTC TGCGTCAAGA CGTTCAGGAC CTTCGCCAGG CCGAAAAATT CACAGTGGCC
AAGATCCGTC AAGACGCAAC CAACAAGCTC AATACCAACA TTCGCGTCGC TGAAAGCTGC
TTTTTGGGGC CTACCAAACT AAAGACTTTC CCGAGCGCCT ATAGGGATCA ACTTTACGTG
ATTCTGGACC AAGTCAAGGC CGATTTGAAC AGTCATTTTG GCAAACCGTT GGACAGTCAG
CTGACGGAGC TCTTGTATGC GTTCTATCCG CAAGGAGGTT TCTACCGAAG GCATCGTGAC
GCAATTCCAG GCTCGGCTTC AACATTACGA GAGTATTCGC TTCTGCTGTA TCTCAATAAG
GATTGGAATG AACAAGACGG TGGACAACTA CGGTTACATT TCGACTCTGG TGATGACGAA
TTACCAGCAG GGGAAGAAGC GCAATGCCGC GATGTCTTGC CTCAGAGTGG TACGTTGGTC
CTGTTCCGAA GCAACGCCAT TCCACACGAA GTCCTAGATA CACAGAAGGA GCGTGTCGCC
ATCATCGGTT GGTATAACCG ACCCGTGGCG AGTACCGATA TTGGGGAACT AGCAGGTGTG
GATCTCAATC CAACGCGAGT CGCACTGATG GGCGTTGCAG CCTCCCTCAT CACGGTAGGG
GTTGGGATGC TTATTTCAGC ATCATAG
 
Protein sequence
MGFGPGFSQL FLLLLFQTAQ SWLSSSKLYG PTESIQRAST PSFSSSIVNS RLFGVSTSVP 
GIATDIPRLE PRHLRELSEN QYVVICDFLP ESLQTALRQD VQDLRQAEKF TVAKIRQDAT
NKLNTNIRVA ESCFLGPTKL KTFPSAYRDQ LYVILDQVKA DLNSHFGKPL DSQLTELLYA
FYPQGGFYRR HRDAIPGSAS TLREYSLLLY LNKDWNEQDG GQLRLHFDSG DDELPAGEEA
QCRDVLPQSG TLVLFRSNAI PHEVLDTQKE RVAIIGWYNR PVASTDIGEL AGVDLNPTRV
ALMGVAASLI TVGVGMLISA S