| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46867 |
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| Symbol | |
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| ID | 7204717 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 660550 |
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| End bp | 663828 |
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| Gene Length | 3279 bp |
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| Protein Length | 918 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185760 |
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| Protein GI | 219121057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.793152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGTTCCAAA CGAACAAAAC GATTCTCTTA TGGGCCCTTG GCCATCGTGG CGCTGGATAC
AGGAACACAA AATTGTTCTA GAATCTCAAA TTGTTCTAGA ATAATAAATT GTTCCAGCCG
AAAGAGACGG CAGTACTTGC TCATCCTACG AGAATGATGA TGGTATCATG GTTGTCTCAC
AATTTCAATC TTCGCGCTTC TTACAACTAC AAGCGCAACC GACATTCCAT TGCACAAATA
CGTCATGGCA TTGGACGAGC GCAGCGACCC TGGTCTACAT GATGACGGGA ACTTGGAAGA
AAACGTCGGA GGTAAGAGAA GATGTGGAAG CATGAAGATT GCTAGCGTTC CTTTCAACGA
TTTCGTTAAT TCCTCCGTTT GCCTTGTTTT CTCTAGAATT TAATGAAGCC GAGCCTACCT
CCTACTCTAC CAAGCCAAGG CCCACCGCGA GCAACCCGAT CGAAGAAGCC ACGGGGTTTT
CTGCCAAATG GACACGTACC ATTAACACAA TTCATATCCC TGTCATTCGC GCCTTATTGT
GGACGAGCAA CAAGTCGGCA ACCAACCCGC GTCGGACGGT GTCTCTCGTG ACTTTCGTGT
CGGTTGCCCT CATTGTGATT GGTATATTCA CAAATTTCTC TGTGGATGTC GACGAAGATG
TCTTGTGGAC TCCCAAAGGA GCACGTCCAG TGCAACACTC GGATTGGATT GACGACCGCT
CCGGCTTTCC TACAACGCCC CGTACCTTCA TCATGTTCTT TCACGCCGAT ACGGCGGACG
TTTTGGGACA AGCTCAAGTC TCGCGCGTCT TCCAGGCCTT GGATGCGGTC CGGACTCTAC
CCGAATACGA CAGCATCTGT GCGAAAAGTA GCAGTACTTC GCAGCTTAAC GAAATAGGTG
AAGTGACTTG CCCGATTTCC GGTATTACCG CCTTTTGGAA CGACACAGCT TCTATTTTTG
AATCACAAGT ATCCAGCGAT GCCGATGTCA TCGAGCAGCT GTCGGCTACT GTTTACCCAG
ATGGAACGCC CGTCTCCGCG GACGATATTT TTGGCAAACG CAATCGGGAT GCGAACACGG
GCTTGCTTAC TAAGGCGCAA GCCTATACCG TTCTGATTGA TTTTCCGGAC ATAGATGAAG
CCGAAGATTT TGAAGAACCC GCCTTAGATG CTGTCTTGGC CTTGCAAGAG CAATGGGAGG
CGCAGTCGGA TACTAACTTT CGTTTGGAAG TTCAGGCAGT TCGCTCATTT TCAGACGAGT
ACGTGCTCCT TTCTTATTCG TTTATTTTAG CGAACGGATT CTTCTAAACA ATGCCCTTTC
ATTTCGTAAA CGACAGGTTT ACCCGTGCGA TCGTTGCGGA CATTCCCTTG GTTCCAATTG
TCTTCGTGAT TATGTCAATC TTTACCTGTG CCGTATTTTT CAAGCGAGAC AAGGTCCGAT
CCCGAAGTCT GTTGGGGTTC AGCGCAGTTA TTTCTGTTTT GCTCAGCATC ATGAGTGGCT
ACGGTCTCAT GTTCGTCTCC GGAGTTCCTT TCACTAGCAT GACCCAAATT CTCCCTTTCA
TTATATTTGG AATTGGTTTG GATGATGCCT TCATCATCTC AGGATCCTAC GAGCGTACCG
ATCCTGCCAA AAGCGCCGTG GAGCGCATCC ATGACACTGT TGAAGACGTC GGCGCTAGCA
TTACTCTGAC AACAGTCTCT TCAACTTTGG CGTTCGGGTT GGGCGCCACG TCCGATGTCC
CTGCCGTCTT CTGGCTCTGT TACTACGCCT TTCCCACCAT CATTCTGGTG TTCCTTTACC
AGATAACATT TTTCGTAGCT TGTATTGTTC TCGATGAGAA GCGTGTTCAG GACAACCGCC
GGGATTGCTG TGTCTGCTTG GTGGTGGACG CTAGCGATGA GAGCGAACCA CAAGCTCTGT
CTAATGGTCG CGGACCTACC CCTTCTGTCA TTGATTATTA CATGGGCCTG TACGCGAAAC
AAATTCTTCG CCCTGTGGTT CAGATTCCGG TCGTGATTTG CTTTTGTGCT TTGCTTGGTG
TATGCGCTTA TAGCGCTACT CTGTTGACGC AGGAATTCAA ATTTACAGAT GTTCTTCCAG
ACGGTTCCTA CGTTGCAGAC TTTCAAACAG CATTCGATGA AAATACTGTG CGCTCGGCTG
TTGCGCCTTA TGCGTACTTT CGGTTCGTTG ATCAAAGTGA TGGAGACATT CAGAGGCAGA
TGGAAGCCTA CGTCGACGAA CTTGTTACCA TAGAAGCGAT CGAAGAGGAC CCCGAGTTCT
TTTGGCTGCG GGACTTTAAA GAATTTGTGA ACGTTAGCGG ATCCCAAAAT TTAGAGTTCA
ACAGCCAGAT TGCGGCATTT TTGTCCAACC CGGTTTATGG CGATCTATAC AATGACCACG
TCGTGCGGGA CGATGCTGGT ACGATTGTTA CATCGCGAGT TCGGTTGCTC ATGGATAATG
TCGATGTTGA AAACGTGAAT GAGCAGGTTG ATGCCCTTGA AGATCAAAGC AGTGTATCTG
GTGGGCAAAA TATTAATCAA GGACGAGGCG AATGGGCTTT TTTTACGTAT GACGGTATCT
ACAACATTTG GGAGTTTTAT GCCGCATCGG TCAATGAAGT CATCTTTACT ACTGTCCTCG
GGGTGGCATC TGTTACAGGG ATTACATTGA TCTTTGTTCC ACACTGGTCT GCCGCTTTCT
TTGTGCTCCC CTTGATCTGC ATTCTCTATG TTGATCTCTT GGGTGCAATG CAATGGGCAG
GAGTTCACAT TAACGCCGTC AGTTACATCA ATCTTGTGAT GTCGATCGGT TTGATGGTAG
ATTTCCTCCT CCATGTGCTT TTGCGCTACT ATGAGTCTCC GGGCAACCGC AAGGAAAAAA
CTTTACACAC TCTGGAAACC ATGGGTGCGT CAGTCTTGGT CGGTGGTATC TCGACATTTC
TCGGGACGCT TCCCTTGGCA TTTAGTTCGA GCACTATCTT TTACACCGTG TTTGTCGCGT
TTATTGGCCT CGTCACACTG GGATGTGGTC ATGGACTTAT TCTACTTCCG ATTATTCTTT
CTAACTTCGG GCCCGAAGAC CAAATTGAGC CTTCAAAAGT GAGCAAGACT CTGGAGCATT
GTGAGACCGA AATCAGTCAA AGTCAGAGGA TTCCGGAAAG CTAGAATTTA GAAGCAATGA
GTGTGATGTA CACATACATA TAGGAATTCA GTTTTACATG ACTGAGAGTG CTCGAGACTC
CTCTGTAGAG CAAAATAAAA ATAATTTACT GTAAAATAG
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| Protein sequence | MALDERSDPG LHDDGNLEEN VGEFNEAEPT SYSTKPRPTA SNPIEEATGF SAKWTRTINT
IHIPVIRALL WTSNKSATNP RRTVSLVTFV SVALIVIGIF TNFSVDVDED VLWTPKGARP
VQHSDWIDDR SGFPTTPRTF IMFFHADTAD VLGQAQVSRV FQALDAVRTL PEYDSICAKS
SSTSQLNEIG EVTCPISGIT AFWNDTASIF ESQVSSDADV IEQLSATVYP DGTPVSADDI
FGKRNRDANT GLLTKAQAYT VLIDFPDIDE AEDFEEPALD AVLALQEQWE AQSDTNFRLE
VQAVRSFSDE FTRAIVADIP LVPIVFVIMS IFTCAVFFKR DKVRSRSLLG FSAVISVLLS
IMSGYGLMFV SGVPFTSMTQ ILPFIIFGIG LDDAFIISGS YERTDPAKSA VERIHDTVED
VGASITLTTV SSTLAFGLGA TSDVPAVFWL CYYAFPTIIL VFLYQITFFV ACIVLDEKRV
QDNRRDCCVC LVVDASDESE PQALSNGRGP TPSVIDYYMG LYAKQILRPV VQIPVVICFC
ALLGVCAYSA TLLTQEFKFT DVLPDGSYVA DFQTAFDENT VRSAVAPYAY FRFVDQSDGD
IQRQMEAYVD ELVTIEAIEE DPEFFWLRDF KEFVNVSGSQ NLEFNSQIAA FLSNPVYGDL
YNDHVVRDDA GTIVTSRVRL LMDNVDVENV NEQVDALEDQ SSVSGGQNIN QGRGEWAFFT
YDGIYNIWEF YAASVNEVIF TTVLGVASVT GITLIFVPHW SAAFFVLPLI CILYVDLLGA
MQWAGVHINA VSYINLVMSI GLMVDFLLHV LLRYYESPGN RKEKTLHTLE TMGASVLVGG
ISTFLGTLPL AFSSSTIFYT VFVAFIGLVT LGCGHGLILL PIILSNFGPE DQIEPSKVSK
TLEHCETEIS QSQRIPES
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