Gene PHATR_46865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46865 
Symbol 
ID7204423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp657130 
End bp658407 
Gene Length1278 bp 
Protein Length394 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185759 
Protein GI219121055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.259126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTGACCTTC CCTCCAGACG CCAGAAATGT ATTTGTAGTG AACCACTTTT TTTCACGTTG 
ACGAAAATGG CCATTTGGGT GCACCCTTGG ATTGCCACTA CCACCGTTCT GTGTTCGTCA
TCTGTTTCCT CGAAGAGCGC CCGATTTTTT CTAAAAAGTG ATAGACTAGC ACTCATGAGT
ATGAAACGCC GTTCCATAAG CCCCAGAATG GCGGCATCCT CAGCGTCAAA CGCAGTGAAC
AAATTGGCCT TCCTAGACGA TTTATTGACC GAGTCCAAAA TGGTAAACTT TACTGCCTCT
CCTGGTAGCA CCGGTAACGT TCTCCAACAC AATAGTGCGA CTAGCACCAA AGCTGGATGG
TGCTTACGAC AGGGTTTGCT GCACATTTGT ACGGTCGACG AAGGATACGC GGCTCCTCTA
GTAGCCCTCC ACGGATTGCC CGCCTTTTAC AGTTGCGTGA CCGAGGCGAC GAACGGAGCC
TGCCGACACG ATGCCACCCA AGACATAAAG GATCCATCGA CTTGCTTCGA ATCTCTTTGC
CGGATTATCG CTGGGCAGTT TGTTTCCGGC AAGTCGGCGC AGGCGGTATG GAAACGCCTT
CTCGAGCACG CGCGACACGA TTTGACGCCA ACTCGCATTT TGCAATTGGT CAGTCAACCG
CAAGGGGAAG ACATTGAATT TGGGCTACAG AAACCGGTAG GACTGACGAA GAACAAAGCC
AAGTCTATTG TTGATTTGGC TCGGCATTTC GAGGACGGCC GTTTGTCGGA GGGTTTTCTG
ACTTCATCGA CCTCTCCATC CGGGGACACC GACAGCACTA TCACCAGTAT TCAAAAAGCA
CTCCTAAAGG TACAAGGTAT TGGTCCCTGG AGCGTCGACA TGTTTCTCTT GTTTTATCTC
GAGCAGCCGA ATGTACTGCC CTTGGGAGAT CTAGGCGTAC GCAAAGGCAT TGCGATTCAT
TTCGCCATGC GGGGATCTGT AAAAAAAGGA AAACAGGCAC AACTGTGTCC AAAGCAGGAC
GCGCCCCAGA TTCGCCGCCG ATTGGAAGCA TACGCACCGT ACCAATCACT ATTGACGTAT
TATATGTGGA GGGCCGCTGA TACTCCGTCG GCACCAGACA GCGCAGCAAC ATTGGAGGGG
AAGGCCAAAT CAGAGACGAA TCACGTTCCG GCCACGTCCA TTCCCACGGA GATGTCAGCT
ACGCCTTCTC GCAAGCGCAA AAGATCTTCT TTTAGAACTA TCACACCATA ATACACCATA
GAGCGACCGG AAGAACTC
 
Protein sequence
MAIWVHPWIA TTTVLCSSSV SSKSARFFLK SDRLALMSMK RRSISPRMAA SSASNAVNKL 
AFLDDLLTES KMVNFTASPG STGNVLQHNS ATSTKAGWCL RQGLLHICTV DEGYAAPLVA
LHGLPAFYSC VTEATNGACR HDATQDIKDP STCFESLCRI IAGQFVSGKS AQAVWKRLLE
HARHDLTPTR ILQLVSQPQG EDIEFGLQKP VGLTKNKAKS IVDLARHFED GRLSEGFLTS
STSPSGDTDS TITSIQKALL KVQGIGPWSV DMFLLFYLEQ PNVLPLGDLG VRKGIAIHFA
MRGSVKKGKQ AQLCPKQDAP QIRRRLEAYA PYQSLLTYYM WRAADTPSAP DSAATLEGKA
KSETNHVPAT SIPTEMSATP SRKRKRSSFR TITP