Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46865 |
Symbol | |
ID | 7204423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 657130 |
End bp | 658407 |
Gene Length | 1278 bp |
Protein Length | 394 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185759 |
Protein GI | 219121055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.259126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TCTGACCTTC CCTCCAGACG CCAGAAATGT ATTTGTAGTG AACCACTTTT TTTCACGTTG ACGAAAATGG CCATTTGGGT GCACCCTTGG ATTGCCACTA CCACCGTTCT GTGTTCGTCA TCTGTTTCCT CGAAGAGCGC CCGATTTTTT CTAAAAAGTG ATAGACTAGC ACTCATGAGT ATGAAACGCC GTTCCATAAG CCCCAGAATG GCGGCATCCT CAGCGTCAAA CGCAGTGAAC AAATTGGCCT TCCTAGACGA TTTATTGACC GAGTCCAAAA TGGTAAACTT TACTGCCTCT CCTGGTAGCA CCGGTAACGT TCTCCAACAC AATAGTGCGA CTAGCACCAA AGCTGGATGG TGCTTACGAC AGGGTTTGCT GCACATTTGT ACGGTCGACG AAGGATACGC GGCTCCTCTA GTAGCCCTCC ACGGATTGCC CGCCTTTTAC AGTTGCGTGA CCGAGGCGAC GAACGGAGCC TGCCGACACG ATGCCACCCA AGACATAAAG GATCCATCGA CTTGCTTCGA ATCTCTTTGC CGGATTATCG CTGGGCAGTT TGTTTCCGGC AAGTCGGCGC AGGCGGTATG GAAACGCCTT CTCGAGCACG CGCGACACGA TTTGACGCCA ACTCGCATTT TGCAATTGGT CAGTCAACCG CAAGGGGAAG ACATTGAATT TGGGCTACAG AAACCGGTAG GACTGACGAA GAACAAAGCC AAGTCTATTG TTGATTTGGC TCGGCATTTC GAGGACGGCC GTTTGTCGGA GGGTTTTCTG ACTTCATCGA CCTCTCCATC CGGGGACACC GACAGCACTA TCACCAGTAT TCAAAAAGCA CTCCTAAAGG TACAAGGTAT TGGTCCCTGG AGCGTCGACA TGTTTCTCTT GTTTTATCTC GAGCAGCCGA ATGTACTGCC CTTGGGAGAT CTAGGCGTAC GCAAAGGCAT TGCGATTCAT TTCGCCATGC GGGGATCTGT AAAAAAAGGA AAACAGGCAC AACTGTGTCC AAAGCAGGAC GCGCCCCAGA TTCGCCGCCG ATTGGAAGCA TACGCACCGT ACCAATCACT ATTGACGTAT TATATGTGGA GGGCCGCTGA TACTCCGTCG GCACCAGACA GCGCAGCAAC ATTGGAGGGG AAGGCCAAAT CAGAGACGAA TCACGTTCCG GCCACGTCCA TTCCCACGGA GATGTCAGCT ACGCCTTCTC GCAAGCGCAA AAGATCTTCT TTTAGAACTA TCACACCATA ATACACCATA GAGCGACCGG AAGAACTC
|
Protein sequence | MAIWVHPWIA TTTVLCSSSV SSKSARFFLK SDRLALMSMK RRSISPRMAA SSASNAVNKL AFLDDLLTES KMVNFTASPG STGNVLQHNS ATSTKAGWCL RQGLLHICTV DEGYAAPLVA LHGLPAFYSC VTEATNGACR HDATQDIKDP STCFESLCRI IAGQFVSGKS AQAVWKRLLE HARHDLTPTR ILQLVSQPQG EDIEFGLQKP VGLTKNKAKS IVDLARHFED GRLSEGFLTS STSPSGDTDS TITSIQKALL KVQGIGPWSV DMFLLFYLEQ PNVLPLGDLG VRKGIAIHFA MRGSVKKGKQ AQLCPKQDAP QIRRRLEAYA PYQSLLTYYM WRAADTPSAP DSAATLEGKA KSETNHVPAT SIPTEMSATP SRKRKRSSFR TITP
|
| |