Gene PHATR_46855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46855 
Symbol 
ID7204711 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp630642 
End bp631601 
Gene Length960 bp 
Protein Length245 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185752 
Protein GI219121041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00892903 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGTTCACA GTCAATTCTA ATCCGGAAGT CTCGCATTTT TACCGCATTT ACGGGATCAA 
TAGTATTGTG CACCGCAAGT GAGCCGCTTA AGCAGTCCCA ACCATCGACT AGACGGTTCA
TTGATTTTCC CATGATTACG GAAGTGCCTA AAATTTCTCG AGGAGCATTT GTTGTTTTGG
AAGGCGTCGA TAGGTGCGGC AAAACAACGC AATCCGGTCT TTTACTGAAA CGCCTTTTGG
CTGCCGGGAT TGCCGCTTGT AGCATGCGCT TTCCGGACCG TACCACAGCA ACGGGAAAAA
TCATTGATCA ATACTTGCAG AGCTCGCAAA ATTTGGACGA TCGAGCGATT CATCTCCTTT
TCTCTGCCAA CCGATGGGAA TCGGCCGATG CATTGACAGC CCATTTACAA GCCGGAACCA
CCGTTTTGTG CGATCGATAC GCATACAGTG GCGTTGCTTT TTCCGCATCT AAAATTGATA
AGAAGGGAAA TTCCTTGCTT TCTCTTGACT GGTGCCAGGC TCCAGATCAA GGCCTACCCG
CTCCTGACTG TGTTATTTTC TTGGATTTGA GTCAAGCAGA AGCAGAACAA CGGGGCGGGT
AAGTAAAATA TTCAGTGCGG TCTAGCAGTA GATATGGGGG ACAAGATTGC GTCCATCTCT
CACATGATTG CGCTACACCT TTCTTTTAGC TATGGTGGAG AACGGTACGA GAAGAAAGAA
ATGCAGATTC GCGTCCGACA TAGATTTGGC GATTTGGAAG CTATAGATAA GGCTTCCGGC
CGTGTTGCAT GGAAATTCAT AGACGCAGCA CAATCTGTTG AGCAGGTAGA AAATGACATC
TGGAAAGCGG TTGAAGAGAC AATCCAAGCA GTGAAAGGTA GCAAAGCCTT GGGGAAAATG
TGGCAAGATG GGGAATATGA ATTCAAATCA GTCGGTGATG GTGAATCAGA ATCACCGTAA
 
Protein sequence
MITEVPKISR GAFVVLEGVD RCGKTTQSGL LLKRLLAAGI AACSMRFPDR TTATGKIIDQ 
YLQSSQNLDD RAIHLLFSAN RWESADALTA HLQAGTTVLC DRYAYSGVAF SASKIDKKGN
SLLSLDWCQA PDQGLPAPDC VIFLDLSQAE AEQRGGYGGE RYEKKEMQIR VRHRFGDLEA
IDKASGRVAW KFIDAAQSVE QVENDIWKAV EETIQAVKGS KALGKMWQDG EYEFKSVGDG
ESESP