Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46855 |
Symbol | |
ID | 7204711 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 630642 |
End bp | 631601 |
Gene Length | 960 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185752 |
Protein GI | 219121041 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00892903 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGTTCACA GTCAATTCTA ATCCGGAAGT CTCGCATTTT TACCGCATTT ACGGGATCAA TAGTATTGTG CACCGCAAGT GAGCCGCTTA AGCAGTCCCA ACCATCGACT AGACGGTTCA TTGATTTTCC CATGATTACG GAAGTGCCTA AAATTTCTCG AGGAGCATTT GTTGTTTTGG AAGGCGTCGA TAGGTGCGGC AAAACAACGC AATCCGGTCT TTTACTGAAA CGCCTTTTGG CTGCCGGGAT TGCCGCTTGT AGCATGCGCT TTCCGGACCG TACCACAGCA ACGGGAAAAA TCATTGATCA ATACTTGCAG AGCTCGCAAA ATTTGGACGA TCGAGCGATT CATCTCCTTT TCTCTGCCAA CCGATGGGAA TCGGCCGATG CATTGACAGC CCATTTACAA GCCGGAACCA CCGTTTTGTG CGATCGATAC GCATACAGTG GCGTTGCTTT TTCCGCATCT AAAATTGATA AGAAGGGAAA TTCCTTGCTT TCTCTTGACT GGTGCCAGGC TCCAGATCAA GGCCTACCCG CTCCTGACTG TGTTATTTTC TTGGATTTGA GTCAAGCAGA AGCAGAACAA CGGGGCGGGT AAGTAAAATA TTCAGTGCGG TCTAGCAGTA GATATGGGGG ACAAGATTGC GTCCATCTCT CACATGATTG CGCTACACCT TTCTTTTAGC TATGGTGGAG AACGGTACGA GAAGAAAGAA ATGCAGATTC GCGTCCGACA TAGATTTGGC GATTTGGAAG CTATAGATAA GGCTTCCGGC CGTGTTGCAT GGAAATTCAT AGACGCAGCA CAATCTGTTG AGCAGGTAGA AAATGACATC TGGAAAGCGG TTGAAGAGAC AATCCAAGCA GTGAAAGGTA GCAAAGCCTT GGGGAAAATG TGGCAAGATG GGGAATATGA ATTCAAATCA GTCGGTGATG GTGAATCAGA ATCACCGTAA
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Protein sequence | MITEVPKISR GAFVVLEGVD RCGKTTQSGL LLKRLLAAGI AACSMRFPDR TTATGKIIDQ YLQSSQNLDD RAIHLLFSAN RWESADALTA HLQAGTTVLC DRYAYSGVAF SASKIDKKGN SLLSLDWCQA PDQGLPAPDC VIFLDLSQAE AEQRGGYGGE RYEKKEMQIR VRHRFGDLEA IDKASGRVAW KFIDAAQSVE QVENDIWKAV EETIQAVKGS KALGKMWQDG EYEFKSVGDG ESESP
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