| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46734 |
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| Symbol | |
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| ID | 7204511 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 318848 |
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| End bp | 322253 |
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| Gene Length | 3406 bp |
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| Protein Length | 894 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185681 |
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| Protein GI | 219120899 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGACCGACAA TGGTTATCCA AATATTTCAC ACTTCCGACG GCGGCCTCGA CCATCTCCAG
ATGATACGGT GAGTGTTTGA AGGAACCGCA CGGGAGCACT GGGAACAGAG ACGAATCTGC
GAAAGTTCCG ATAAGGACAA ACCGCGGTAT ATCTCAAGTC ACCATGCCAC CGAGCATTGA
TCGATCTCTC CATTGGATCG GCACGTGGAC TCTTAGCGCG CATATTCTCC CTCTAAAGAG
ACGCCGCGGT CTCTCCACAA TTTTCATTTT CATCGTTTTA AGCTGCTGCA AAATTCAGTT
GCAATCCTTG GCAAAGGCCT ACACGGGAAA CGGCAAGCCT AGTCGGAAAC GTTTGATTCC
TCCCACTAAG CGTGAACCTC GCTATTTCGC GCAGGAGGCG TTGCTTCCGG GCTTAGCAAA
TCTCGATGAG CTACAACCTG AATTTGTGGT ACCAGGGCTA CCCGTTCTGT ACACGAATGA
TCCCAAGAGA GTCTCGGACT GGCTTGGCGA CCACGTCGGG CCAAATGGAG GCACGTTAGG
TTTTGATGTT GAGGTAAGCG AACCAAGTCA GCCCACAAAA TATCCTCGAC GGCGGTTTCT
TTGATTCTTG TAGAGGAGCC AAGCTGCTGA GTTTGTATGC ATGGAGAGAC GAGGAGAAGC
AATGATTTCT TACCAGCTAC ACTGCAGGGG TTTAGTCGCC CATTCCCCGT GCCAGAAAAT
CGTATACTTG CCTTAAAAGG CAGGACTGAG CTTCTCTTTC CTTCACGCAT GCTATTGCCC
GCTGACGTGT CGTGGTAATA CGATACGAAT ATGTGTCTTA CAGGTTGTCT TTTTTTTGGT
TTAGTCGGTA CCTGAGATTC CGCATATCCT ACGAAAAGCA ACATTCCGAG GACCTGCCCT
TGTGCAACTT GCTACACCAA ACGCAAGCCT CGTCATTCAA CTCGCGCGAA ACAATGGTCG
CCACAGTCGA GCATGCATCC CAATACTCGA AGCCGTGCTG GCCGATGAAC ATATCATCAA
AGCTGGTGTT CAAGTCGATT TGGATATGCT TGAGCTTCAT CAGAAATGGC ATACTATTGA
AGCTCGCAGC CGCCTTGATC TTGGGGGACT TCTCATTTGT GAAGACGACG CAAATCGCCG
TCCTGGCCTG AAGCGCCTCG CCGAAAGCGT TCTTGGCGTA AATCTACCAA AGAGCAAGAG
TTTGGCTAAG AGCAACTGGA GCCAGGTACC ATTGAGCCCC GCTCAAATAG CCTATAGTGC
ACGGGATGCC TGGGCGGGGG CTGCAATAGT GGAAGAGTTG GTCCGCCTGG ATCCCATTAT
TTTCGAAAGA GTGTCTTTAG TCGAGCGCCT GCGCTCGCAA CGGCCTATAG CCGAGCTATC
GGTGCGTTTG AATAAGCGGA GAGAGGCAAA GAGTCTCCTT TCGTCGTTAT TGGCACCATA
CTCGTTCCAG AAAGGATCAC AAGTATCAGT TGACGAGCTT CCGCCTTGGA AGCAAAAGAC
GGTCAAGAAT CTGAGGCAAC AGGTACGCGA GAACAAGTGG GACGCGATGG AGGTATTCGA
CTTTGAGCCA CTACGATTCA TAAACGGATT TAATAGCACC CTATAATTTC TTTTTGTAAT
GTCCAGCACG TTTTTTGCTA CAGAGGTTGT GTTACAGGGC ATTGCAAGTT GAACACCGCT
CACAGTAAAT AGCTATGTTG CATCAACGGC AGCGCTTCGA CTGGGAAAAA TTACAGTAGA
GTTGTTCCAC TATGTAAATC TACATCATTG CTTTTACGAC AGGCACACGA CATCATTTTG
TTGTTGCCAG CAATTATGTC GATTTTCACC AGGGAAAGAT CCAAATACAC CGTCTTATTT
TTGCCAGAAG GAAAGAATTG CCATGGGGAT CCCTCAGTTT CTTTCCTACA TTCTAGAGAC
GGCTGGTAGA AATGTCGATC TCCAGTATTA TCAAGGTGGC ATTGTTCCTC GTCAAGATGA
AAGACAAACA CGAGACGGAG CCGACAGTCA GAAGAGGCCT CTACGGATTG GCATAGATGT
AAGCTCCTGG ATCTACAAGG CATGTCAAGG ACACGGGAGC ATGCTCGGCG ACGAACGACA
CTTAACGAAT TATGGCCGGG CAGCCCTACT GCAGAATGAA GAGCAACAGA AGACTGGCGA
TTTAAATGAC ACAAAAATTC GAGACGCACA GAAAAGGGAA ATGGTTCTGA GATACGTCAA
TGCTTGTAGC TTGTACGTCA TCGAGCGATT GCAACGTTTG CAGTCTATGA CAGATGCGGA
AATTCTTGTT GTTCTAGATG GTGCAACACC TCCGATAAAG CGTGTTGAAG TTCGCGATCG
ATCAAACCGA CGGAAACAAG CTGCCCAGGA TCGTGATCGA CCTGCGGATA CTGATGAAGA
TGCTCTAGAT CGACGCTTTA AAGCTTTTCG ACGAGCTGGC GCTGGAGAGT ATTATACCGA
CGTTGTCGAA AGTATTTTGC AAGGACTCCG TGCAAAATCG ATTCCTTTTC TTGTCTCACC
CTACGAGTCG GATGGGCAGT TGGCGTTTCT AGGAGACAAA GGGTACATCG ATCTAATCGC
AACGGAGGAT TCCGATTTAG TGGCATATGG AGTGAAAAGT CCTATTCTTT ACAAGTTGGT
CAATTCCCTC GGCGACGAAG CAGTACCTCG AGGAGTTCTT GTGCGACGGG AAGATCTCGG
AGCAACAACC GAGATCAACC TCTGCGACTT TACCGCTACC ATGCTGGCGG TATTATTCGT
GGCTGCGGGA TCGGATTACT GTAAAAAATT GAAGGGTATC GGCGTAAAGG CGGCTTCATA
TATCGTCCGA GCGGCCTTCT ATAGTAAGCG AGAAAAAGGA TGCAGCCCTC TAGAGGTTGT
TTTTCGAAAG CTGTACTCCG AGACATGGGA CAAACAGACA CTGACAGATG ATTTCAAACG
AGACTACGAG AAAGGCTTTT TGGCAGCTCT CCTTATGTTC CGACATCCTG TTGTTTTCGA
CTCGGTCCAC GGAGTTTGCG CTACTATGGG AGATCCGTTA GAAGGAGATC CCCAACTCAT
CTCCTACCCT CCCTACGCCG AGCTTTGCCG CGACTCTGAA CGCAGAGCCG CTGTTTGCGG
TAATCTGCTA CCATCTCCTC AGGCGCTGTT TGTCGCGGAA GGGTGGCTTT CGGCACGAAC
GTTTCGTCCG TATCCAAAGA CTGAAATCCC CTCAAATGTA AAAAAGTGGC TTTGGCAAAA
TGAAAAGCAA GCGCGTGTGC CTTCTACGAA TCAAAAGCAC AGCAAGAGGA GAAAGGAGAC
AGCCACGGAC GAAGGGGATT TAGAAGGAGA CTTCGAGACC GAGGAGCAAG CGATGACGTG
GGTGGACGAA GTCAGTGATG GCGACAGCCC AGTAGCCTGT CTCTAA
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| Protein sequence | MPPSIDRSLH WIGTWTLSAH ILPLKRRRGL STIFIFIVLS CCKIQLQSLA KAYTGNGKPS
RKRLIPPTKR EPRYFAQEAL LPGLANLDEL QPEFVVPGLP VLYTNDPKRV SDWLGDHVGP
NGGTLGFDVE SVPEIPHILR KATFRGPALV QLATPNASLV IQLARNNGRH SRACIPILEA
VLADEHIIKA GVQVDLDMLE LHQKWHTIEA RSRLDLGGLL ICEDDANRRP GLKRLAESVL
GVNLPKSKSL AKSNWSQVPL SPAQIAYSAR DAWAGAAIVE ELVRLDPIIF ERVSLVERLR
SQRPIAELSV RLNKRREAKS LLSSLLAPYS FQKGSQVSVD ELPPWKQKTV KNLRQQLCCI
NGSASTGKNY RKDPNTPSYF CQKERIAMGI PQFLSYILET AGRNVDLQYY QGGIVPRQDE
RQTRDGADSQ KRPLRIGIDV SSWIYKACQG HGSMLGDERH LTNYGRAALL QNEEQQKTGD
LNDTKIRDAQ KREMVLRYVN ACSLYVIERL QRLQSMTDAE ILVVLDGATP PIKRVEVRDR
SNRRKQAAQD RDRPADTDED ALDRRFKAFR RAGAGEYYTD VVESILQGLR AKSIPFLVSP
YESDGQLAFL GDKGYIDLIA TEDSDLVAYG VKSPILYKLV NSLGDEAVPR GVLVRREDLG
ATTEINLCDF TATMLAVLFV AAGSDYCKKL KGIGVKAASY IVRAAFYSKR EKGCSPLEVV
FRKLYSETWD KQTLTDDFKR DYEKGFLAAL LMFRHPVVFD SVHGVCATMG DPLEGDPQLI
SYPPYAELCR DSERRAAVCG NLLPSPQALF VAEGWLSART FRPYPKTEIP SNVKKWLWQN
EKQARVPSTN QKHSKRRKET ATDEGDLEGD FETEEQAMTW VDEVSDGDSP VACL
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