Gene PHATR_46716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46716 
Symbol 
ID7204503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp269138 
End bp270126 
Gene Length989 bp 
Protein Length282 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185672 
Protein GI219120881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.269942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGTGAATCCA ATACTCGTCT AACCTGTAAT TTGTTCTGGG ATCCACTGCG ATTCACAGAT 
AGTGATCCTG GACCTTCGGT TTCTGTGTTT TGCTTTGACT AGTAAGGAAA AGTGGGGATG
AACTTGAATC TGAACATAGA ATGGCTGGAT CAGTAGGTAA GGATGGCAAT ATTGCCCAAA
AAACAATGCC ATATCAAGAC GTCAAGGATC GCTTTGCTCG AGACGGCTTT GTCTCCATCA
GAGGCATACT TCCGACGGAT ATCGTAGAGG AATGGGAGGA TTTTGGAATC GAGTTTTTCA
GAAAAACCTT CGAGCACCTT CATGAATACG GTCATACGGC TTATCCAGAG CACTGCCGAA
TGCGAAACGG AGAAAAGGAA TTCGCCCTTG GCCTTGGCGT AAAAAGTGGC TTTCGAGAAA
TCGTTATGAG GAGCCCAGGA CGCTACGAGA TTTCAATACT TAACAGCGTC AAAGCTGGCC
AAGGTATGCC GTCATTGGTT CGAATAAAGG ATCTGCTGGC GGAAACCGTG CCTATACTTT
TGGAGGAAAG GTCTTGGGAG TCGCTTTCCG TTTGCAACTT GTCATTTGTT GTATCAACTC
CTGGCTCAAA AGAGCAAGCA TGGCATGCCG ATGGTGGACA CGTCAGCCTA CGAGAGCATC
TCCCTTGCCA TGTATTTAAT ATTTTTGTTC CGCTGAGAAA TGTTTCCTTG CAAATGGGGC
CAACTGAGTT CCGTCCTGGT TCCCACATTT ATACTCGCAA CCTTGCGCCG ATGATGCTGG
CAGCCAAAGC TCGAAAGACG TTGAGGGCTC CTGCTGCTCC CTTGCTTAAC AGAGGGGACA
TATTGGTATT TGACTACCGT GTACTCCATC GAGGACTCGC CAATCGATCC GGCTGCAATC
GCTCATTCCT CGTCCTGACC GTCTCTAAGC CATGGTTCAA AGATATTTTG AACTTCCCGG
CAAGGTCTAT GCATAGTACG GTATCGTAG
 
Protein sequence
MAGSVGKDGN IAQKTMPYQD VKDRFARDGF VSIRGILPTD IVEEWEDFGI EFFRKTFEHL 
HEYGHTAYPE HCRMRNGEKE FALGLGVKSG FREIVMRSPG RYEISILNSV KAGQGMPSLV
RIKDLLAETV PILLEERSWE SLSVCNLSFV VSTPGSKEQA WHADGGHVSL REHLPCHVFN
IFVPLRNVSL QMGPTEFRPG SHIYTRNLAP MMLAAKARKT LRAPAAPLLN RGDILVFDYR
VLHRGLANRS GCNRSFLVLT VSKPWFKDIL NFPARSMHST VS