Gene PHATR_46687 details

Gene Information

• Locus tag: PHATR_46687
• ID: 7204417
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: +
• Start bp: 192141
• End bp: 194240
• Gene Length: 2100 bp
• Protein Length: 626 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002185649
• Protein GI: 219120835

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACACGAAA TCCCTCACTT CCTGAAACTA CAGGCGAAAC CTCGGACGAA TTCACATACG 
ATGTCCAAAA AAAGTTTCGC AGTTTGTGCT CTTCTCGCGC TCATCGTCGC TTGCCAGCAT 
TCCTTTCGGG TCACTGGATT TACTATTCCT CGTCAAGTTC CAGTCCGGTT TCGTACAGCT 
TCGGCTCCAT TCAGATCTAG AGCAGATGCA TTCGATCGTT CCATTCCTCA ATCGGCATCC 
CTTGCGACGG AAGGTATAAC GAGCTCGTCC CTCGGCCAAG TTGTCCTGCA AAAGATGGAG 
TCGTCTCGGG ACAAGGCTCT TGAATTCGCC GACATGTTTG CATTGACTCC GGCAGAAGCT 
GCCTTTTATA GCCTCTTTGC CGCTATTCGC GAAGCTGTTC CACTCGGTCT TAAAGGACAA 
CCGTTTGTTT TGCGACACGC AGAAATTGAA AAGGCCATGC ACCAAGAATC CCAATGGCCT 
GGATTCTTTA CCATGAAGGA TTTGGAAAAG GCCCTCAGCG ATGACTTTCT AGATGCAGCG 
CGAGGCTCAA CCGATAATCG CAAAGGATGG CAGGTAGGCA CAGTTTCCCC AAACACCAGC 
CGCTTCTGAT TGTTTCAAGT ATTGGCTCAC AATTAGCTGC CTTTCTAGAT CACGGATGTT 
TCGGTTCCAC GGGGGCAATC GTTCGAAGAA GCTCGCATGA CTTTTCAGGA CGTGCAAGCG 
GCATTGGAAA AAGGGACCGT CATCTTCAAC GCTGCCGGGG CGCACATCCC CAAATTAGCG 
GGTCCATCGT TGGCCTGTAC AGAATCCACT CTCCTGCCAT GCGCTCTGAA CTTGTACGTG 
ACGGATGCGG GCAAGCGCAC AAGTGCTCCG CCGCATACGG ACAAACAGGA TGTAGCGGTG 
GTTCAAACCT CAGGGCGCAA GCACTGGAAA GTATATTCTC CGCCTAATCC GGCCATGAAA 
CCAACCGTTG ATATCTTTGC CCGTGGGAAG GGCGATGACA GTTTGCCTCT ATACATACTG 
GAATCCGATT TGGGCTGTCA ATTGCTGTTG GAGACAACGC TAAACCCGGG CGATGTAATG 
TTTGTCCCAG CGGCCTTCCC GCATACAACG AGCACCGTGA CTGAGGACGA TAGCACACAC 
GCCGATAAGA CAAGTATTCA TTTGACACTG GGCATTGACC ATCACATTTG GGAGTTAGAT 
TATTTGTGTT GCCGTCGCTT GGCTCTCCGG CGGGCCAATG TGAAAGATAC TGCGCTCGGC 
CAAACAGGTG AAGAAGATAG TCCGTATATA GGGGCCGCCA ACGAAGTTAC AGCGCCGTTA 
ATCAACGATC TGTTTGCAGA GTTGCCGCTA GGTTTGCTTG GTGGTGTCGA CTACGCGGCT 
CCTGTTATAG AACACGTTGC CGCCGAATTG GAACGTATCA GCCGCGAAGT GGACGAAACA 
ACTGCGTCCG CTGTTGGTGC CTCCGTATGG CGCGAAGCAG TGGAAAGGCT TCGAACTCAA 
GGGATGGAAT TGTTGGACAT TCATCGCGAC ATGTATCTAG CTGCCCTAGA GGAGGGTCAA 
ATTCGAGACG AGGAAGCCGC TATGACAGCA CACTTGGGCC AAGCGGTCCG TCGCGCGATG 
ACTCCGGAAC GCATGCAGCG GCTTAGTCTT TTCCGCGTGA AACGATATTT TGATCAAATT 
GACGCGAGCA AGAAAGCTCT TCAGCAGTGG TCTTATGCTC GCGTCGAGCC AGAGGGCGAG 
GGGGATTTGG CCGATAACTG GGCTTTGACC ATGCCTGTAA AAGTTGGGGA CCAGGTAGAA 
GCCGATCTTG GAGGGGCTTT TTTCCCAGCT ACAGTCAGTC GAGCTTCGGG AGGCACCTTT 
GACGTAAATT TTTTTGACGG TGATCGAGAA ACAGGCTTGG AACGAAACCA AATCAAGCTA 
CTGGCTCCTC CAGCACCACA AGGTGATATA AACACCTCCA ACATGACACC GAAACAATTG 
AAACGATGGA AAAAGCAACA AGAGAAAACG AAGTAAAGCA CCAGCTAAAG ACTTAAAAAT 
AGGAAGAATG TAACATGTCT CAGGCTCTTG GGTTTGCACC CAATTGCAAG ACGCTCAAAA 

 

Protein sequence

MSKKSFAVCA LLALIVACQH SFRVTGFTIP RQVPVRFRTA SAPFRSRADA FDRSIPQSAS 
LATEGITSSS LGQVVLQKME SSRDKALEFA DMFALTPAEA AFYSLFAAIR EAVPLGLKGQ 
PFVLRHAEIE KAMHQESQWP GFFTMKDLEK ALSDDFLDAA RGSTDNRKGW QITDVSVPRG 
QSFEEARMTF QDVQAALEKG TVIFNAAGAH IPKLAGPSLA CTESTLLPCA LNLYVTDAGK 
RTSAPPHTDK QDVAVVQTSG RKHWKVYSPP NPAMKPTVDI FARGKGDDSL PLYILESDLG 
CQLLLETTLN PGDVMFVPAA FPHTTSTVTE DDSTHADKTS IHLTLGIDHH IWELDYLCCR 
RLALRRANVK DTALGQTGEE DSPYIGAANE VTAPLINDLF AELPLGLLGG VDYAAPVIEH 
VAAELERISR EVDETTASAV GASVWREAVE RLRTQGMELL DIHRDMYLAA LEEGQIRDEE 
AAMTAHLGQA VRRAMTPERM QRLSLFRVKR YFDQIDASKK ALQQWSYARV EPEGEGDLAD 
NWALTMPVKV GDQVEADLGG AFFPATVSRA SGGTFDVNFF DGDRETGLER NQIKLLAPPA 
PQGDINTSNM TPKQLKRWKK QQEKTK