Gene PHATR_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_1682 
Symbol 
ID7204526 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp384775 
End bp386170 
Gene Length1396 bp 
Protein Length437 aa 
Translation table 
GC content47% 
IMG OID 
Productanthranilate synthase. anthranilate synthetase. chorismate lyase 
Protein accessionXP_002185694 
Protein GI219120925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0944619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGACCCGATG AGCCAGCGTG GGTCGACGAA GACGATGTTG GATTGGAAGT AAATTTGCTC 
GCAACGAGCC GATTACGAAA GTTAAGGAAA AGTAAAGCAG AAGTAGCTGC TCTTGCCCTT
TGCGGTACCG ACCTTGAGGA GCGTTTAAGG CAGCGATATC AACGGACAAC CCAAGCGACG
GCTCGTACAG ACTGGGCTCG TTTAAGTGAT AGTTCGACTT TGATTGACAA AGACGCCGGC
AATAACGACG AGGACTCGGA CTCGGACTTC AAGTCGTTAT CGACTTCTCT GTTGCTCCAC
TCGACCTCGA CTAGACGCCT CCCTCCGAAC ACTTTAAATC TTGTGCGTTG CCCTGACGCA
AATCAATCCG ACCCAAATCA ATCAGTTCTC CAGGCGGTAC ATTTCCACCC TGCATCTGAT
GCTGACCAAC CACTCCTTTT AACTGCGGGT CTCGACAAAA CGCTCCGATT TTTTCAAGTG
GGAGTAGACA AAAGTGAAAA AGTGCATGGA ATTCATTGTA AGTTGATGTC GTTGCTTTGT
TCGAAAATAC GCACATTTAC AATTTCTGTG ATCTCAATTG TCCCCTTCAT TAGTCCCTAA
ACTCCCGATT TATAGTGCTT CTTTTTTGGG ATCGTCAGGT AATGTTGTCG TGAGTGGGCG
ACGGTCGTTT TTCTATATTT ACGACACTGT CGCAGGAAAG CTGGAACTCA TTCCCAAAAT
TTTAGGAAGG GAAGAGCGAA GCTTGGAAAA ATGCTTTCCC TCTCCCGATG GTCGTACTAT
TGCCTTTGTT GGAAATGATG GATACATTAT TTTGTTTGAT GCACACGCTA AGCAATGGAT
TGCTGATTTG AAGATTAGCG GTAGCGTCAG AGCAATTACG TTTACTCCTG ATGGTGAGTA
CATTCTAGCC AGTGGAAGTG ACGGAGAGAT CTATCGATGG GATCTTCGAA CGCGTCGATG
TGTTGAACGA TTCACAAACC AAGATGGGAC GATCACATCT TATCTGGCAG CTTCCTCCCG
TCATCTAGCT GTGGGAGCTG AAAGTGGTGT TGTGAACATG TTTTCGGAGC ACAGCATGGG
ATACAGAGCG GTCGGCCATG TCGTGGTGTC TGAACGCAAT CCAATGAAGT CCATATTGAA
CCTCCACACG TCGGCTGATA TGGTGCGGTT CAACGGCGAT GGACAAATTC TAGCATTTTC
GTCTCGCCGT GAAAAAAATA GCATGAAGTT GCTTCATGTA CCGAGCGCCA CTGTCTTCTC
AAACTGGCCC ACCTCTAAGA CTCCATTAGG TTTCGTTTGG TCAATGGACT TTTCCCCAGA
AAGCAAATAC CTTGCCGTGG GCAATGACAA AGGAAAGTGC CTCTTATACC GTCTCATGCA
CTATCAAGAA CAGTAG
 
Protein sequence
RPDEPAWVDE DDVGLEVNLL ATSRLRKLRK SKAEVAALAL CGTDLEERLR QRYQRTTQAT 
ARTDWARLSD SSTLIDKDAG NNDEDSDSDF KSLSTSLLLH STSTRRLPPN TLNLVRCPDA
NQSDPNQSVL QAVHFHPASD ADQPLLLTAG LDKTLRFFQV GVDKSEKVHG IHFPKLPIYS
ASFLGSSGNV VVSGRRSFFY IYDTVAGKLE LIPKILGREE RSLEKCFPSP DGRTIAFVGN
DGYIILFDAH AKQWIADLKI SGSVRAITFT PDGEYILASG SDGEIYRWDL RTRRCVERFT
NQDGTITSYL AASSRHLAVG AESGVVNMFS EHSMGYRAVG HVVVSERNPM KSILNLHTSA
DMVRFNGDGQ ILAFSSRREK NSMKLLHVPS ATVFSNWPTS KTPLGFVWSM DFSPESKYLA
VGNDKGKCLL YRLMHYQ