Gene PHATR_13439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13439 
Symbol 
ID7204568 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp18532 
End bp19617 
Gene Length1086 bp 
Protein Length347 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185812 
Protein GI219121166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCCTG GTGGAACAGG AGTTGGTGCA CCAGATGGAA CCAATGAGGG CTCACCAGAA 
GGCACAGCCG ATGGAACTAC TGAAGGAAAA ACAGAAGGAA TAGCGGAGAG AGAAGGTAAA
TTTGAAGGTG TCAATGATGG AAGCCTTGAG GGCTCTTTTG ATGGTTCCAA AGAAGGGATA
GAAGATGGAA GCACAGAAGG TTGGCTTGTT GGTGCTGTAG AAGGTAGTGA TGAAGGTTCA
AATGATGGAA TGGAGGACAA CGACGGTGCA CTTGAAGGAA GAGCGGATGG CGCCAAGGAT
GGCAATGATG AGGGCTGGCT TGAGGGCTCA GAAGATGGGA GTAAGGAAGG TATTGCCGAC
GGAAGCGAAC TTGGTGCGCT CGAGGGTTCA GATGAAGGCA GAGACGACGG ACCAGATGAC
GGCTCACTCG AAGGAAGAGC GGATGGCGCC AAGGATGGCA ATGATGAGGG CTGGCTTGAG
GGCTCAGAAG ATGGGAGTAA GGAAGGTGTT GCCGACGGAA GCGAACTTGG TGCGCTCGAG
GGTTCAGATG AAGGCAGAGA CGACGGACCA GACGACGGCT CACTCGAGGG AAAAGCCGAT
GGCGCTGAGG ATGGCAATGA TGAAGGCCGG CTTGAGGGCT CAGAAGATGG GAGTAAGGAA
GGTGTTGCCG ACGGAAGCGA ACTTGGTGCG CTCGAGGGTT CAGATGAAGG CAGAGACGAC
GGACCAGACG ACGGCTCACT CGAGGGAAAA GCCGATGGCG CTGAGGATGG CAATGATGAA
GGCCGGCTTG AGGGCTCAGA AGATGGAACC AATGACGGGT TTGATGATAT GGATGGTACA
TTGGACGGTA ATCTTGAAGG CACTGAAGTT GGCATTGCTG AGGGTATTGA AGAAGGTGAC
AATGATGGGT CAAATGACGG CATATTTGAG GGTACAAATG ACGGTACTGA TGATGGGTTC
AAGGATGGAA GAGCAGATGG TTGACTAGAG GGCACTCTAG ACGGGGCTGA AGATGGTGAA
CTTGAAGGGA CAGAAGTGGG AACCAATGAG GGGAGTAAGG ACGGGATTGT TGACGGTATA
GATGAA
 
Protein sequence
MVPGGTGVGA PDGTNEGSPE GTADGTTEGK TEGIAEREGK FEGVNDGSLE GSFDGSKEGI 
EDGSTEGWLV GAVEGSDEGS NDGMEDNDGA LEGRADGAKD GNDEGWLEGS EDGSKEGIAD
GSELGALEGS DEGRDDGPDD GSLEGRADGA KDGNDEGWLE GSEDGSKEGV ADGSELGALE
GSDEGRDDGP DDGSLEGKAD GAEDGNDEGR LEGSEDGSKE GVADGSELGA LEGSDEGRDD
GPDDGSLEGK ADGAEDGNDE GRLEGSEDGT NDGFDDMDGT LDGNLEGTEV GIAEGIEEGD
NDGSNDGIFE GTNDEGTLDG AEDGELEGTE VGTNEGSKDG IVDGIDE