Gene PHATR_13309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13309 
Symbol 
ID7204564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand+ 
Start bp596340 
End bp596888 
Gene Length549 bp 
Protein Length182 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185739 
Protein GI219121015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0894911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCACGCTATT TGGCTGTGGA TTGTGAGATG GTCGGTATCG GGAGTGAAGG CCAACAATCT 
GCTTTGGCCC GAGTTTCAAT AACAAATTGG AACAAAGATG TGGTCTTGGA CACTTTCGTG 
AAAGTTCCTG GTAAAGTGAC CGACTTTCGT ACCTGGGTTT CGGGTGTTCA GCCAAAACAC 
CTCAAGTCGG ATCAAGCCAT GGATGTGGAT GCTTGTCGCA AGACTGTGGC TAGGCTACTG 
AAGGGAAAGA TTCTAGTCGG ACATTCTTTG AAGAATGATT TGCATGCCCT CATGTTGAAT 
CATCCGAAAC AAGACATTCG GGACACGGCC ACGTACCGGC CTTTCCAGAG ATTGGGAGGC 
AAGAAATGGA GACCAAGGAA GCTCCGCGAT CTTGTCAAAC AACACGTGGG CCTTACAATT 
CAAGAGGAGG GCCAATCGCA CGATTCTGTT GATGATGCGA ATGCTACTAT GGATCTGTTC 
AAAGTAGCTC GCGAAGTGTG GGAGCGAGAG CTTGAACAAA AGAAGAAGAA GCTGCCCGTG 
AATAAGTAA
 
Protein sequence
SRYLAVDCEM VGIGSEGQQS ALARVSITNW NKDVVLDTFV KVPGKVTDFR TWVSGVQPKH 
LKSDQAMDVD ACRKTVARLL KGKILVGHSL KNDLHALMLN HPKQDIRDTA TYRPFQRLGG 
KKWRPRKLRD LVKQHVGLTI QEEGQSHDSV DDANATMDLF KVAREVWERE LEQKKKKLPV 
NK