Gene PHATRDRAFT_56506 details

Gene Information

• Locus tag: PHATRDRAFT_56506
• ID: 7201649
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: -
• Start bp: 207257
• End bp: 209246
• Gene Length: 1990 bp
• Protein Length: 594 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180962
• Protein GI: 219120448

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.286813
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGACCC GGTTGACGTA ATGGTTTGCG CCAAGGATGG AAGCCAAAAG AGTTTTCCAG 
AACCTTCCTT GTTGCAACGG AAACTCTCCC TATCGATCGA AATCCACATC TCGAGTTCGA 
ACGGCGAGAA CGCAAACCGG TTCCGTTGAC ACGTCTCCGA TTTGCGGGGG AAGTCGACGT 
TTTCCCGCTC CATGGCTCAC TGTCAGGGAC TTTCACAAAC AGGCGCTTTC TGGCATTCGC 
ATTCATTTTG TACAAACTAC CACGCTTCTC TCTTCTGCGG AAGGCCCCAG CCCATAATTG 
TGACGGTCAA GCAATGACGG ACTTGTCAAC AAATGCGACC GCCAAGGATA AGAAAGATGG 
ACCAAACTGG ATTCGAGGAG TCAATCTGGG TGGTTGGCTC GTCATGGAGC GATATATAGT 
TCCCTACCAG TTCGCCATCA CCACTTGTCA CGTCCAGGGC GATTTTTGCT GGTACCCTGG 
GGCTCTAAGT GCGCCTCCTT TGTTACACAA GGACTACAAG CTCTGCGACT TGACACGCTG 
CCACCCTTAT CGGAATTTGA CTATATTCAA TGGCACGGAC TATCCCATCG ACGAATGGAA 
TCTGGCCAAG GCTTTTGACA ACCAAACCTT GGCCACAAAA TGGTTTGACT ATCACTTCAA 
CAATTTCATT CGCAAAGAGG ATTTGGTGCG CATGAAAAAG GCTGGTTTGA CTCATTTACG 
GGTGCCGTTG CCGCACTGGA TTCGTGGCGA TATCCGGGAG AATGAGCCTT GGATTGCGGG 
AAATCGCTGG AAAGTTTTTG TGAGGCTTTG TCAGTGGTGT CGAAATATTG GCCTAGAAGT 
TTGGCCGAAT CTACACACGG CTCCCGGTTC TCAAAATGGC TTTGACAACT CCGGAATCGA 
AAGCTCGGTC TATACGTGTA AAGGCTGGGG GAGGCACCCA GAGAATATTG AGCGTACGTT 
GGATGTTATA CACGAAATTT CTGACGCGAT CGCCAAGGAC CACCTGTTGG ATGTGGTCAC 
GGGTTTTGGA CTTTTGAATG AGCCTTTCGG TGATTGCAAG TTGAATGGGT ACGAACGGTT 
TCTGGAGGAC GCGTTGGCTA TCACTCGTGC CAACATGGGC CCAAACGTTC ATATTTTCGT 
TTCGGACTTG TTTGGAGCCC CAAAATTCAA TGACGGATCC TGGTGGTTGG ATCCAGTCAA 
GTACCACAAC ACCTACTTGG ATACTCATTT TTACCACACG TTCGACAGCC ATACGCGCTC 
CATGAGTCCG AAAGAGCACA TCAATCACGT TTGTCACCCT GAGGAACTCC AAGCCGAAAT 
TACTAGCTGC TGCTACCAAG ACGCCCCCAG TACCAATTCC ACGCCCAGCA GAGGAGTCAA 
GCGCATTTCT GCCGAATGGA GCGCGGCCTA CGACGCCATG CCCGGAGAAC TTTTGCAGTT 
TGTCATGGAA GGCATTGCGG TCAACGGGAC GGCACCAGAT TTCTACCGTA TCCTGGAACC 
CGACCGCCGC GAATTCTTGA GAAAATTTGT CGAATCTCAA ATGGTGGCGT ACGAAGCAGC 
CGATTCCGAT TTGGGGCGGG GCTGGTTCTA CTGGACAATC AAAATGGAAG GCGGTGCTTT 
CGCTGAGTGG GACTTCTCTC GTGGTCTTGA GGAAGGCTGG ATTCCGCCCA TTGCAACCCC 
CGGTGTGGCG AGTCAAGATG TTTATGGGAA CTGTGACCGC ATTTTGGAAA GCACCAACAA 
TTCCATGGCT ATTGTCCACG CCTTTCCCTG GGGCGACGAA TCATACTGGA AGCAATATCC 
GATCGTTGAA TCTAGTGAAA CGCGGATACA TCGCAGCTTC GTTTGGCTTG GTATAGCATT 
TGTTCTAGCT TTTGCTCTGT CCAACCTTTT GCGCCGACGC CGTCAGCTTT TTGGAAAATA 
CACCAGCATT GACTCCGAAG TTGACGTGGA AGTACCAGGT AAAAGCAATC CGCAATATGT 
GCAGGAATAG 

 

Protein sequence

MLTRLTRFLA FAFILYKLPR FSLLRKAPAH NCDGQAMTDL STNATAKDKK DGPNWIRGVN 
LGGWLVMERY IVPYQFAITT CHVQGDFCWY PGALSAPPLL HKDYKLCDLT RCHPYRNLTI 
FNGTDYPIDE WNLAKAFDNQ TLATKWFDYH FNNFIRKEDL VRMKKAGLTH LRVPLPHWIR 
GDIRENEPWI AGNRWKVFVR LCQWCRNIGL EVWPNLHTAP GSQNGFDNSG IESSVYTCKG 
WGRHPENIER TLDVIHEISD AIAKDHLLDV VTGFGLLNEP FGDCKLNGYE RFLEDALAIT 
RANMGPNVHI FVSDLFGAPK FNDGSWWLDP VKYHNTYLDT HFYHTFDSHT RSMSPKEHIN 
HVCHPEELQA EITSCCYQDA PSTNSTPSRG VKRISAEWSA AYDAMPGELL QFVMEGIAVN 
GTAPDFYRIL EPDRREFLRK FVESQMVAYE AADSDLGRGW FYWTIKMEGG AFAEWDFSRG 
LEEGWIPPIA TPGVASQDVY GNCDRILEST NNSMAIVHAF PWGDESYWKQ YPIVESSETR 
IHRSFVWLGI AFVLAFALSN LLRRRRQLFG KYTSIDSEVD VEVPGKSNPQ YVQE