| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54560 |
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| Symbol | |
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| ID | 7201610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 32419 |
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| End bp | 34093 |
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| Gene Length | 1675 bp |
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| Protein Length | 526 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180934 |
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| Protein GI | 219120390 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.548849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACAATAGA CGCATTCTTA TCGACGTCGG CTAACTTATT GCGAAGAACT GATAAAATTA
CTCGGATCCG CATCCGACCC ACAATACCTT CGCGATGGCC TCAGCGGCTG CCTCCCCAAC
AGCCGAGCAG ACGGCTGCTT CCAGAGCAGA GTCTTCCCGC GAAGTTCTCA GCGGAGAACG
CCTGACAGCC GCTGAAACCG TCCCGATCGC ATCAGCAAAC AGCATACACC TGTCATCGAT
ACTTCCGCGG TACAGCAACT ACAATGTGAG GGTAGACAAG GACCGAAGTG ATCGAGCTCT
AGAGATCAGA TTGCTGTCGT CTCAACGACC GCATATGCGC GCGTTTTACT GCGCAACGAT
TTCCTTTTTC GCTGCCTTTG GCATGTGGTT TTCCGTTTCT CCATTTTTGG GTATTATTGG
CGAGGAATTA TCGCTGTCGC GGTCCCAACT CTGGTTGTCC ACCATTTGCT CCGACGTCGC
CACGATTTTG TCGAGATTCG TAGTAGGACC GGCCTGCGAT TTTTACGGAG CGCGTTTGCC
AATGGCGGTC GTCTTGATTC TATCGTCTAT CCCCACCGCA CTGACAGGGA CTGTACGCTC
CTTTGCCGGA CTTTGTGCGG TCCGGTTTGG AACCGGAATT GCCGGTAGTG CTTTTGTCAT
GGCACAGTAC TGGATGGGAC AAATGTTTTG TCAGGAAATT ATTGGAACAG CGAACGCAAT
TGTCGCTGGT TGGGGTAATT CAGGTGGTGG AGTCATTCAA GTGTTACTTG GTACCGGCTT
GTATCCCTTC TTGAAAGAAG CGTCTGGCAA TGATGAGGCG TGGAGGTTTG TCTTTGTCGT
ACCGGCCGTC TTTGCGATTG CCGTGGCAAT CGTTATAGTT AAATCGTCCG ACGACGCTCC
ATTGGGATAC TACCGTGAAA TGAAACGCAA CGGGACCATG GATTTGCACC ATTCCACCAT
GATGAGTGGG ACAACGTCCC GAAACGCTTG GCTGCTCGCG GTGGCCTACG CCTGCTCCTT
TGGCGTCGAA ATCACTTTCA ACAACGCCGC TTCGCTGTAC TTTCGCGACG AATTCGGTGC
TTCGACGTCG TCAGCCGCAG CCTTGGCCAG CATCTTTGGA TTGACCAATC TTTACGCCCG
CGCATGCGGC GGTATCGTCA GTGACCTTAT GAATCAGCAC TGGGGCATGT GGGGTCGACT
AAGTTGGGGC TGTATCGCTA TTGTGATTCA GGGCGCCTCC ATTATTGCTT TCGGGTACGC
CGACACGTTG ACCAGTGCGG TACCGTTGTT GATTCTCTTG AGCAGCTGCG TGAACGCGAC
GGAAGGTGCC ATCTTTGGCA TTGTACCGTA CGTCAACCCG GCGGTCGCCG GATCGATTGC
TGGAATTGTA GGACTCGGTG GCAACGTCGG TGGTGTATGC TTTGCCTTGG CCTTTCATAG
TTTATCGTAT CTGCAAGCCT TTAAGGTCAT GGGGGCGGTT GCCATGGCAT CGAGCGCAAT
CTTCTTTTTT GTGGACATTC CCGGACACGC AACGCTAACG TCAAGGAGTA AGTCACTCAA
AGCCATCAAC GCGAGGAGAG AAACCACGGA AAGATTACCG ATGGATCAAG ACGAAGATAG
AATACAAGAA AGTCGCCGTA GCAAGGACGA CGCGACCATA CCCGCCGCTG TGTAG
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| Protein sequence | MASAAASPTA EQTAASRAES SREVLSGERL TAAETVPIAS ANSIHLSSIL PRYSNYNVRV
DKDRSDRALE IRLLSSQRPH MRAFYCATIS FFAAFGMWFS VSPFLGIIGE ELSLSRSQLW
LSTICSDVAT ILSRFVVGPA CDFYGARLPM AVVLILSSIP TALTGTVRSF AGLCAVRFGT
GIAGSAFVMA QYWMGQMFCQ EIIGTANAIV AGWGNSGGGV IQVLLGTGLY PFLKEASGND
EAWRFVFVVP AVFAIAVAIV IVKSSDDAPL GYYREMKRNG TMDLHHSTMM SGTTSRNAWL
LAVAYACSFG VEITFNNAAS LYFRDEFGAS TSSAAALASI FGLTNLYARA CGGIVSDLMN
QHWGMWGRLS WGCIAIVIQG ASIIAFGYAD TLTSAVPLLI LLSSCVNATE GAIFGIVPYV
NPAVAGSIAG IVGLGGNVGG VCFALAFHSL SYLQAFKVMG AVAMASSAIF FFVDIPGHAT
LTSRSKSLKA INARRETTER LPMDQDEDRI QESRRSKDDA TIPAAV
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