Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5288 |
Symbol | |
ID | 7201670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 562721 |
End bp | 563284 |
Gene Length | 564 bp |
Protein Length | 188 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181029 |
Protein GI | 219120587 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0250872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTAGCGTTTT CGGGAGGAAT TGACTCGTCC GTTGTCGCTG CTGCTGTGCA TGCTGTCCAG ACAAGTACAG AAACGGCTAT AGCCGTTCTG GGTGTTTCAA ACGCCGTTCC GGAGGAGCAA GTCCTCCTTG CCCGGAGAAT AAGCAGCCAT ATTGGTATAC CACTGACTGA AGTTCCCACG ACGGAAGGAT CGGACGATAT TTATATAGCC AATGCTGGCC AAGCTTGTTT GGCATGCAAA ACTCATCTGT ATTCGACGCT AAGCGCGATT GCGGCGCACG CCAAACATTC TGATGGAGGC CGACAATTGT ACAACGGAAC GAACTCAGAT GATCTGAAGG ATCCAACCCG ACTCGGGTTG ATTGCGGCGG AAAATTTTAA GGTTCTATCT CCATTGCGAG AATTGACCAA GGCAAAGGTC CGTGTCGTAG CCCGTCACAT GGGATTACCG AACTGGAATT ACGCGGCATC GCCCTGTCTG CGATCTCGAT TGGCCCTCGG CGTGGAAGCG TCGGTTGATC ACTTACACCG GATTGAACGA GCCGAACGTT TTGTGAAGAC AAGA
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Protein sequence | VAFSGGIDSS VVAAAVHAVQ TSTETAIAVL GVSNAVPEEQ VLLARRISSH IGIPLTEVPT TEGSDDIYIA NAGQACLACK THLYSTLSAI AAHAKHSDGG RQLYNGTNSD DLKDPTRLGL IAAENFKVLS PLRELTKAKV RVVARHMGLP NWNYAASPCL RSRLALGVEA SVDHLHRIER AERFVKTR
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