Gene PHATRDRAFT_5288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5288 
Symbol 
ID7201670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp562721 
End bp563284 
Gene Length564 bp 
Protein Length188 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181029 
Protein GI219120587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0250872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAGCGTTTT CGGGAGGAAT TGACTCGTCC GTTGTCGCTG CTGCTGTGCA TGCTGTCCAG 
ACAAGTACAG AAACGGCTAT AGCCGTTCTG GGTGTTTCAA ACGCCGTTCC GGAGGAGCAA
GTCCTCCTTG CCCGGAGAAT AAGCAGCCAT ATTGGTATAC CACTGACTGA AGTTCCCACG
ACGGAAGGAT CGGACGATAT TTATATAGCC AATGCTGGCC AAGCTTGTTT GGCATGCAAA
ACTCATCTGT ATTCGACGCT AAGCGCGATT GCGGCGCACG CCAAACATTC TGATGGAGGC
CGACAATTGT ACAACGGAAC GAACTCAGAT GATCTGAAGG ATCCAACCCG ACTCGGGTTG
ATTGCGGCGG AAAATTTTAA GGTTCTATCT CCATTGCGAG AATTGACCAA GGCAAAGGTC
CGTGTCGTAG CCCGTCACAT GGGATTACCG AACTGGAATT ACGCGGCATC GCCCTGTCTG
CGATCTCGAT TGGCCCTCGG CGTGGAAGCG TCGGTTGATC ACTTACACCG GATTGAACGA
GCCGAACGTT TTGTGAAGAC AAGA
 
Protein sequence
VAFSGGIDSS VVAAAVHAVQ TSTETAIAVL GVSNAVPEEQ VLLARRISSH IGIPLTEVPT 
TEGSDDIYIA NAGQACLACK THLYSTLSAI AAHAKHSDGG RQLYNGTNSD DLKDPTRLGL
IAAENFKVLS PLRELTKAKV RVVARHMGLP NWNYAASPCL RSRLALGVEA SVDHLHRIER
AERFVKTR