| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46559 |
|---|
| Symbol | |
|---|
| ID | 7201699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 702068 |
|---|
| End bp | 705505 |
|---|
| Gene Length | 3438 bp |
|---|
| Protein Length | 1009 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181058 |
|---|
| Protein GI | 219120648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTG CCTACATTGG ATGTCTTCTG TTGGCGCTCT TTGCGGATGA AGGCGAAGGC
GCCTCTGTCC GTGGATCCAA AGACGACGTT GTCGCCGTCG AAGCACCCCC TCGAGTCCGT
CACTCTTCCA GCACCGCGCT TGTATCGGTT CCTCAACGTC GACTCGCGGA AGATGCTTTT
GAACCACTCA CTTGCAATTC GAGCTTTTCC AGTTGCATTC CATGGACATC GCGTTGGGGG
CGGAGTGCCG TCAAGACCAC CCTCATCGTC ATCCCATGTG GCCAATGTAT TGTGATGAAT
CTCGACAGTC CCAAGCTCAC CCTGCAAGAA GGTATCGATA TCCGGGGTAA GCTCGTATTT
CCCGACCGTT ATGAGCTTAC TGTGGAGACA CCAGAGGTTG TGGTTCAAGG CGAGCTCGAG
ATGAGAAGCT CCAAGCTTGT CGACGGGAGC CCCGCAATTA AGTTTGTCTT GTATGGTAAC
GGTGATCGAC ATTTTGATCC AGTCAACAAC AACAGGAACG CTTGCGGCGG GTCCAGCTGC
AACGGAGGGG CTCGCCCCAT TACAGTAGCT GGTGGAAAAG TCAACCGTAA GTTTATGTCA
ATGAAAAACG AATCACGCTG GTTTCTGCAC ATCGATTCGT GACGATCGGC ACTCATAAAA
ATCTCTCTAC GCTATTTCCA GTTAATGGCC TTCCTACAAA CACTCCAACC TGGCTACACG
TTTACGACGT TATCGGAAGC TCGGCCATTG TCGTTTCCAA TTCGGTCCGT AATAAATGGG
GTGCCGGCGC AACTATCGTC ATCACCTCTG AGCACCAAGG TTACTTTGGC GAGCAAGTTC
GTAAAATCAC CAGCATTTCG AACGTCGGCT CCAATAGCGT CCGTCTCAAT CTCGACCAAC
CCATCAACCG TCCGGTCACG CTTCGCGACA GCCCAGACTT TGCCACCGAG GTAGCCTTGC
TGTCACGCAA CATTGTCTTT GAAGGGGCCC CCGGAACGAA GGGTGGCCAC TTTTGGATCA
TGCACACTCC CCGAGTGAGG CAGCGTATCG AAGGAGTGGA ACTCGTTAAC TTCGGACAAG
AAGGCCTCTT GGGTAGATAC CCAATCCACT TTCACATGTG CGGGGATGTC TCAGGCTCGG
TAGTAGTCAA GAATACCATT CGCAATTCCA ACCAGCGCTG CGTTGTCGTC CACGGTACCA
ACAACCTCCT TGTTCAAGAA AATGTAGCCT ATTTCACCAA AGGACACTGT TACATGTTAG
AAGATGGCAT CGAGACGGGC AATCAGTTTA TACGAAACAT TGGCATACGC ACTATTAAAG
CAAAGGTCAC TATTCCGAAC ATGGGTAGCA ACGGCAGGGA ATCTGATAGG TCTGCCAGTA
CCTTCTGGAT CACGAACGCT GACAACTCGT GGATCGGAAA TGTAGTAGCC GGATCCGAAG
CCCTGGGCTT TTGGTTTGAG CTGTTGGTCC GTGGAAACCT GGCCAACGAG CACCAAGACT
TTGATCCTAT GATGGTTCCG ACCCGCAAGT TCGAAGACAA CGTCGTTCAT AGCGTATTTG
GGGTAGGGAT GACCTACTAC TTGAGCGGTT ACATCCCGGA AACACTGCAG TACTTCAAAA
ACAACAAGTT CTTCCGCAAC CATCACCTTG CGCTCCGTAT CCACCGGACA CGAAACATCG
TTCTGACTGG CAATAAGTTC TCGGACAACA GATATGCCAT TCAAATCGAT CGTGACGAAG
AAATTCATGT CACCGACACA ACCATTGTTG GCTATTCCGA TCTATTCAAG GACGTGGTCA
GAAGGAATCG CTTTGCCCAA GCACCTTGCG CCCAAGGGAT ATCTTTCCAA TCGACTAATC
CATGGAAAGA CAAGATGGAT TCGGAGCTCA ACGGTGTCAT TTTGGACAAA GTCAGATTTT
CTGGATTTTC CAACGCGGTG TGTTCGTCTT CAACCGCAAT CGAGCTGGAT TCCCGACTCG
ACGGGTACAA ATCGTTCGAG ATGTTCTCAC AGTACTCCGG CGCCACCGTA AGTGACGCGA
ACTCGATTGA CTTTTGTCGT GGAAAGTCTG CCGGTGCACG TGATGTGTAC GTGTCCGATA
CCACAGGTTC TCTTCTCGAC GGCGTTGCCT CTGCTCCTTC TACTCTGATG GTCAACTCGC
CGGAGCTGGC AAGCTTTGTC AATCCCAGTG CATGTACCGA AAACGCAGCT CGATGCTACA
CCTACTGTAG CAACACTTGC TTCCGCACCG TTCACTACTA CGTCCCAGTG GGCCAAAGTC
GAGACTACAA GCTCAAAGTA TGCGACCGCA AGGACGCGTC CGACTGTACC GTACTCTCCG
GTTACGTACA CTTTAACCAC CCCTGGCCTC GCCGATTTGC CGTGCATGTC CCGTCAGGAC
GGGAGTACGA CACTTACTTC CTCGACAAGG GAGTGCCTGT GTACCCAACG AATGTCGAGA
TTGTGTTCCA GGAAAAGCTT TGCCCAACGG CACCGGATGA TGATGATATC GCTCTTCTCT
ACAAGGCTCG AGGTACCACC TTTCCCCCCA CGCCTAGTCC GACGACAGCT CTCGCCGCAT
GTGGAAACTT GATCGCAAAC TCGGACTTTG AGCGTGGTTA CAACGGATAT TGGGATGCAC
AAGGAGCCGG TACATTGTCT ACCACAGCTG GCTATAAATC TGCCACAGCT ATGTACTACG
CCTCTGGTAA TCGCAACCGG TACTGGGTGG GACCATCACA CCAATGGCGA GAAGGTCTGG
ACTTGAAATG TCTAAAGCAG GGTACCACAT GGGAGTTTTC TGCTCGCTTG AAGCTTGTCG
ACTCAACGAC TGGAAGGGGA GCCTCATGTA ACACAGGCTC GTCCTCGGAA GGCGAAATGT
GCCCTCAGGT GCAGCTCATT GTGCGCGACC AATCTTGGAC TCAGCATTCT TTCCGGATCA
GCGGCTTCGA CGGTGGGGAC ACTTGGGTAG CCAATGGATT TAACGAGTTC AAAGGCTATT
GGACAATCCC AGCGAATGGT TCAGGATGGC GAGGGGGTGT CGCAAACATG CGAGTGATAC
TTTCCGAATT CCCACTTGGT ATGGATTTGG TTGTTGACGA TTTTGAGTTG ACCCAATTTG
TTTAAAGCGA CGTACACGTT ACCGTTGGAT CGATTTTGCT GGAAGGGACC ATCCGTGCAT
GCCAATGTTG GTTTCTTGGA ATTTTAATTT GAGGTACAGT TAAATCTGGC GATCGATGAT
TTCGGTTGTG GCCTGAGCAA GACAACATTT TCGGATTCCG CCCACAGCCG TACCGTGGTA
GAACTACTTG CTTGAAGCTC ACTTGCGTGC AATAGCATTA ATCCAAGTAT AGCAAATTCC
TTATTTGTAA GTTGGTTCAA GATAATGCTC TACCAAAAAA AGTGCAGGGG CTCCTTCCGG
ATCGTCAGTC TCCTCATG
|
|---|
| Protein sequence | MKVAYIGCLL LALFADEGEG ASVRGSKDDV VAVEAPPRVR HSSSTALVSV PQRRLAEDAF
EPLTCNSSFS SCIPWTSRWG RSAVKTTLIV IPCGQCIVMN LDSPKLTLQE GIDIRGKLVF
PDRYELTVET PEVVVQGELE MRSSKLVDGS PAIKFVLYGN GDRHFDPVNN NRNACGGSSC
NGGARPITVA GGKVNLNGLP TNTPTWLHVY DVIGSSAIVV SNSVRNKWGA GATIVITSEH
QGYFGEQVRK ITSISNVGSN SVRLNLDQPI NRPVTLRDSP DFATEVALLS RNIVFEGAPG
TKGGHFWIMH TPRVRQRIEG VELVNFGQEG LLGRYPIHFH MCGDVSGSVV VKNTIRNSNQ
RCVVVHGTNN LLVQENVAYF TKGHCYMLED GIETGNQFIR NIGIRTIKAK VTIPNMGSNG
RESDRSASTF WITNADNSWI GNVVAGSEAL GFWFELLVRG NLANEHQDFD PMMVPTRKFE
DNVVHSVFGV GMTYYLSGYI PETLQYFKNN KFFRNHHLAL RIHRTRNIVL TGNKFSDNRY
AIQIDRDEEI HVTDTTIVGY SDLFKDVVRR NRFAQAPCAQ GISFQSTNPW KDKMDSELNG
VILDKVRFSG FSNAVCSSST AIELDSRLDG YKSFEMFSQY SGATVSDANS IDFCRGKSAG
ARDVYVSDTT GSLLDGVASA PSTLMVNSPE LASFVNPSAC TENAARCYTY CSNTCFRTVH
YYVPVGQSRD YKLKVCDRKD ASDCTVLSGY VHFNHPWPRR FAVHVPSGRE YDTYFLDKGV
PVYPTNVEIV FQEKLCPTAP DDDDIALLYK ARGTTFPPTP SPTTALAACG NLIANSDFER
GYNGYWDAQG AGTLSTTAGY KSATAMYYAS GNRNRYWVGP SHQWREGLDL KCLKQGTTWE
FSARLKLVDS TTGRGASCNT GSSSEGEMCP QVQLIVRDQS WTQHSFRISG FDGGDTWVAN
GFNEFKGYWT IPANGSGWRG GVANMRVILS EFPLGMDLVV DDFELTQFV
|
|---|
| |