Gene PHATRDRAFT_46491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46491 
Symbol 
ID7201578 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp499907 
End bp501355 
Gene Length1449 bp 
Protein Length385 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180843 
Protein GI219120198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.427203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGA CACACGCATC GTATCATTCC TTCCGGAGCA CGGAAGTTAC CGAGGCATCC 
GCACTGAATC CCGGGAGGAA GGCGCACGCT GCAGAGTCGC GGTCGCCCCG GACCCCAGGC
CGTTCCGTGG TGCGCCGGGG CGTCGCGGTG CTGCTCGGCG TCGCCGTCGT AGCAGGGATA
TGGTCTCCCC ACGCCTTGGG GACGATTCCT ACCGCGAGAG AAGCCGCCTT GGCGGAAAGC
CTCGAAGTGC CCTTGTGGGG CAATGTACGC AAAATCCGTG ACGCCCAAAA CTTGGCCGAT
CACTACCAAA AATCCCTCTT GCTCCAGTCG GGACAAATGA AGCACGTTCT GAAAAAGATT
GAGAAAAAGG GAAGCATTGA CGACTATGCG AAACCACCAG AGGGCTGTGA AGCCACCGTT
GTCATTGTCC GACGTAAGTC GCTACGTGCC ACTTCAGCGT CGCACGCCTC TGATTACAAT
CCAGCCGTAT CCACGTACAT TCCTACACCT GTCTTTCTCG TGGGCTCTAG TATCACTCAC
ACGGTTCGTC TTTCCGTTTA CTAGATTGCG AAAAAGGCAA CATACGGGAG CATTGCAATT
ACGCCGGATA CGAAAGATCC GTGTACCTAT CGACCCTTTT TGGTGACGCC GGTGAGCGTT
GGCCGGCCCC ATCCTTCATT TTTGCCATGA GTCCGGGCGG ACGGCACAAG AAGCGCAAGA
TGAACTTTCG CGAAATCGAA ACCGTCGGGC CCTTGTCTGA TAAGATCGGC GTCCCCGTTG
ACTACTCCTA CAGCGAAAAG ACGGTCAACA AGATGGCCGC GGAAATATTG ACCTTTTTGC
AAACTGGTGC CCTTTGCGGC AAGGTGGCCC TGATTAGTTG GAAACATAGC AACATTGGAC
ACTTGGCGCA TCATTTGGGA TGCGGCCCCA GCGAGGGATG TCCACTGGAT TACCGTGGAC
ATTCATTTGA TAACGCCTGG CAACTCAAGT TCGTCTACCA GGAATCGCTT CATTCGGTGC
GCAAGGATTT AAAGCTGCGG AACCAAAAAC CCTCCTGGCA TGTCTTTGGC TCCGTGCAGC
CTGAAGGATT TGATCCCCTC GCATTTTCCA AGCGCATGGG CGATTACCCG CTGAATGGAA
CCGCCCACGG AGCCCGCTGG CAGAACGCGG CCGTCAATAT TCCCGAACGC AAACATCTCC
GCGATACGCA GTCCTGGAAG GACTTGCTAG ATGGGGAGTG GCCAACAGAT ACTACCCGAA
CAAGCAAAGT TCGGGGTGAC CATTTCTAGA AGTTTTACAT GACGCGGAGG TCGATTTGTT
AGAACCACGA CGCACTTTGT CGCCAGCGTC CTAGCATGCC ACATTATATG TACAATACAA
GAACTGCGAC AACACACCGT ACCACGTGAA TATCATACAC TTTATAAAAA TATAAATCGT
AAACACCGC
 
Protein sequence
MAQTHASYHS FRSTEVTEAS ALNPGRKAHA AESRSPRTPG RSVVRRGVAV LLGVAVVAGI 
WSPHALGTIP TAREAALAES LEVPLWGNVR KIRDAQNLAD HYQKSLLLQS GQMKHVLKKI
EKKGSIDDYA KPPEGCEATV VIVRHCEKGN IREHCNYAGY ERSVYLSTLF GDAGERWPAP
SFIFAMSPGG RHKKRKMNFR EIETVGPLSD KIGVPVDYSY SEKTVNKMAA EILTFLQTGA
LCGKVALISW KHSNIGHLAH HLGCGPSEGC PLDYRGHSFD NAWQLKFVYQ ESLHSVRKDL
KLRNQKPSWH VFGSVQPEGF DPLAFSKRMG DYPLNGTAHG ARWQNAAVNI PERKHLRDTQ
SWKDLLDGEW PTDTTRTSKV RGDHF