Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46491 |
Symbol | |
ID | 7201578 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 499907 |
End bp | 501355 |
Gene Length | 1449 bp |
Protein Length | 385 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180843 |
Protein GI | 219120198 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.427203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACAGA CACACGCATC GTATCATTCC TTCCGGAGCA CGGAAGTTAC CGAGGCATCC GCACTGAATC CCGGGAGGAA GGCGCACGCT GCAGAGTCGC GGTCGCCCCG GACCCCAGGC CGTTCCGTGG TGCGCCGGGG CGTCGCGGTG CTGCTCGGCG TCGCCGTCGT AGCAGGGATA TGGTCTCCCC ACGCCTTGGG GACGATTCCT ACCGCGAGAG AAGCCGCCTT GGCGGAAAGC CTCGAAGTGC CCTTGTGGGG CAATGTACGC AAAATCCGTG ACGCCCAAAA CTTGGCCGAT CACTACCAAA AATCCCTCTT GCTCCAGTCG GGACAAATGA AGCACGTTCT GAAAAAGATT GAGAAAAAGG GAAGCATTGA CGACTATGCG AAACCACCAG AGGGCTGTGA AGCCACCGTT GTCATTGTCC GACGTAAGTC GCTACGTGCC ACTTCAGCGT CGCACGCCTC TGATTACAAT CCAGCCGTAT CCACGTACAT TCCTACACCT GTCTTTCTCG TGGGCTCTAG TATCACTCAC ACGGTTCGTC TTTCCGTTTA CTAGATTGCG AAAAAGGCAA CATACGGGAG CATTGCAATT ACGCCGGATA CGAAAGATCC GTGTACCTAT CGACCCTTTT TGGTGACGCC GGTGAGCGTT GGCCGGCCCC ATCCTTCATT TTTGCCATGA GTCCGGGCGG ACGGCACAAG AAGCGCAAGA TGAACTTTCG CGAAATCGAA ACCGTCGGGC CCTTGTCTGA TAAGATCGGC GTCCCCGTTG ACTACTCCTA CAGCGAAAAG ACGGTCAACA AGATGGCCGC GGAAATATTG ACCTTTTTGC AAACTGGTGC CCTTTGCGGC AAGGTGGCCC TGATTAGTTG GAAACATAGC AACATTGGAC ACTTGGCGCA TCATTTGGGA TGCGGCCCCA GCGAGGGATG TCCACTGGAT TACCGTGGAC ATTCATTTGA TAACGCCTGG CAACTCAAGT TCGTCTACCA GGAATCGCTT CATTCGGTGC GCAAGGATTT AAAGCTGCGG AACCAAAAAC CCTCCTGGCA TGTCTTTGGC TCCGTGCAGC CTGAAGGATT TGATCCCCTC GCATTTTCCA AGCGCATGGG CGATTACCCG CTGAATGGAA CCGCCCACGG AGCCCGCTGG CAGAACGCGG CCGTCAATAT TCCCGAACGC AAACATCTCC GCGATACGCA GTCCTGGAAG GACTTGCTAG ATGGGGAGTG GCCAACAGAT ACTACCCGAA CAAGCAAAGT TCGGGGTGAC CATTTCTAGA AGTTTTACAT GACGCGGAGG TCGATTTGTT AGAACCACGA CGCACTTTGT CGCCAGCGTC CTAGCATGCC ACATTATATG TACAATACAA GAACTGCGAC AACACACCGT ACCACGTGAA TATCATACAC TTTATAAAAA TATAAATCGT AAACACCGC
|
Protein sequence | MAQTHASYHS FRSTEVTEAS ALNPGRKAHA AESRSPRTPG RSVVRRGVAV LLGVAVVAGI WSPHALGTIP TAREAALAES LEVPLWGNVR KIRDAQNLAD HYQKSLLLQS GQMKHVLKKI EKKGSIDDYA KPPEGCEATV VIVRHCEKGN IREHCNYAGY ERSVYLSTLF GDAGERWPAP SFIFAMSPGG RHKKRKMNFR EIETVGPLSD KIGVPVDYSY SEKTVNKMAA EILTFLQTGA LCGKVALISW KHSNIGHLAH HLGCGPSEGC PLDYRGHSFD NAWQLKFVYQ ESLHSVRKDL KLRNQKPSWH VFGSVQPEGF DPLAFSKRMG DYPLNGTAHG ARWQNAAVNI PERKHLRDTQ SWKDLLDGEW PTDTTRTSKV RGDHF
|
| |