Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46465 |
Symbol | |
ID | 7201810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 421401 |
End bp | 422741 |
Gene Length | 1341 bp |
Protein Length | 401 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181005 |
Protein GI | 219120537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.814798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTCTCACG TCACTATCAT TGACTCTGTT TGTAGGTTGC GTCCACTCAG AGTTGTTTTC CTGGAATAAA AAGCGCGGAT TATTCCAAAT CAGTCCGACT TTCCGGAACT CTCAGCATAA AAGTGAGCAC ATGCCATGAT TCATCTGTGG ATGGTTGTCC TGGCGTATTG GTCTGTTCAT ATTTCAGTCG TTTCGTCTCG GAAGACGTAT GATGAAGTTT CAAAGAAACC AGTCGCCTCA GTGCAGTGTT CCCTTCTTTC GAGGGACGTC GTTTTTCGTA GGAATGTCAC TACGGGCGAG TATTACGTTG CAACGGCGAC GAAGATAGAA GACGAGGCCG TCATGCCCTC TGTAGACGAC AGCACGTTTC GAGAGTGCTG GTGTACGACA TTGTTAAGCC GCAAGGCCGA GTTTTGCCCT TCTCACTTCC ACTCTTGTAC GGTTCGCGGA GATACCGGCC CTGTACGCTG TATTCGGTCC TCTGGTTCCA CAAATTTGTT ACGAGCAGTT TGGCCTGGTG TGCTCTTTTG GTTTTCTTGT CTCCTGTGCG CAGTCGTGTG TACCACAGCG GGACGATCAT GCGTACACTT TGTCCAACGC CAAATCTTTG GTGGAAATAA TAGTCGCTCT GCGGAGCAGA ATAGCCAAGA TGGCGACGAT CCAATTTTGA ATGCGAATCT GACTTCTATT TTGTCTCGTC ATCCTCAACG AGCGGCACAG ATGTACAGGT CAGCAATCCA TCGGGAATAC CTCGTTTCCA GAAATTTCGA TCAGGCTCGT CATCGCAACG GGTACGTGCG TCTTTGGGGG CGCATTTGGA CAGCCCGTGT CTTACTATCA TACAATGGGT ACGGCCGTGA TCGAGGAGAC AGCAGAGACA ATGAGTACAC TAGCCATTCC GTGAAGGAGC TATGTTATAC ACCTGTGCTG CTGCTTAAGA CAAAAAGATT TGTGTCGGAC CCGGAAGAGG AAGGAGACAA TACGCAGTCC TCGTCCTGGA TCTCAACAAA GTTTCGACGG GACCAGGCGA CCTTGGACGA GATGGATGAG CAAATGGAAA AAGGAAATCG CTGTGCCATT TGTCTAGAAC AGCTACGCGA AGGTGAGGTC ATTGGCGATA TCGCTTGTGG ACATATGTTG CACAAGGACT GTTTAAAAAC GTGGCTATCT CGACACAATC GCTGTCCACT TTGTCAACAC ATAGACATAG CAATCTCGGG TTTTAGAATG TTGCCTAGAC CAAGGATCAC AACCGAAATT GTGGGGCCGA ATGAGTTGCA CAGAATGGTT GCGGCTGAAG TAGCTACTCA CAGTCAGGAC GTTATTGCAA ATGATACTTG A
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Protein sequence | MIHLWMVVLA YWSVHISVVS SRKTYDEVSK KPVASVQCSL LSRDVVFRRN VTTGEYYVAT ATKIEDEAVM PSVDDSTFRE CWCTTLLSRK AEFCPSHFHS CTVRGDTGPV RCIRSSGSTN LLRAVWPGVL FWFSCLLCAV VCTTAGRSCV HFVQRQIFGG NNSRSAEQNS QDGDDPILNA NLTSILSRHP QRAAQMYRSA IHREYLVSRN FDQARHRNGY VRLWGRIWTA RVLLSYNGYG RDRGDSRDNE YTSHSVKELC YTPVLLLKTK RFVSDPEEEG DNTQSSSWIS TKFRRDQATL DEMDEQMEKG NRCAICLEQL REGEVIGDIA CGHMLHKDCL KTWLSRHNRC PLCQHIDIAI SGFRMLPRPR ITTEIVGPNE LHRMVAAEVA THSQDVIAND T
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