Gene PHATRDRAFT_46353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46353 
Symbol 
ID7201900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp90980 
End bp92019 
Gene Length1040 bp 
Protein Length296 aa 
Translation table 
GC content60% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180752 
Protein GI219120008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTGGTGTTG TTGGTGGTGG TTCCGAGTGG TACGTCTACG ACTCACAACG ACGCTGTTGG 
TTCTCGGCCT GGGTCTGTGC GTATCGTGCC ATCATCACTA CACTGCCGCC GCCGTTCCTC
GTCACGGACC GTGGCATCGA TCCGGAATCA TGTCGACGTC ACCATCCACC GATACCACGG
CTCCAGAGTC CCCCACTCCC ACGGACCCTG CACCACTCAC ATTCCGTACC AATCCCAGAC
ACCCTCACAA CGAACCACAA CAGTACCCAC AACAGTACCC ACTAATTCTT TACGGACTGC
GCCACGGCAC TTCGGTCGCC AATGAATGGA TGACCGGACC CAACGCCTGG GGTGCCTCCA
CCTTTCGGGA CGACGTGACG CTCCGGGACG CGCCTCTCAG TGACGCTGGA CGAGCCCAGG
CCCGGCAATT GGCCAACACT CTGGAACTAT CCAACGCTGT ACCACCACCC ACGTCATCGT
TATCACCGTC GTGTTCTCGT GCGGAACTCG AAAACGTGCA ACTCGTCGTC GTGTCGCCTT
TGCGGCGTTG TTTGGAAACC TACGACGCCG TGAGCCCACG GTTGCGGCGG AACGACGGAA
GTCCCGGACC ACCCGTTATC GTCCAACCCT GGGCGGCCGA ACGCGTCTTT ACCGTGGCGG
ATCAAGGGAC GCCAGGCACC GCTCTGCGCA ATCGCTATCC CGACTGGGAT TGGAGTCTCG
TGACGGACCA GCCTTGGTGG TACGATCATC ACCACGATAA CAACAGCAAT AACAACAACA
ACAACCACCA ACTCGACGCC ACCCCCTACG TCGAATGGCG TCCCTCCCAA CAAGGACAGT
GGTACGCGGT TCCGGGTGAA CCCGAAAACG TCTTTGCCGC ACGCATGCGA CGGTTGGAAC
AGTGGTTGCG GGCGCGGCCG GAACGACACA TTCTAATCGT CACGCACTGG GCCGTGCTGC
GTCACTGGAC GGGACAAGAA ATCGACAATT GCGGCATTGG CAAAATCGAA TGGCGTCGCG
ACGAGTCTAC CGACCCGTAA
 
Protein sequence
MSTSPSTDTT APESPTPTDP APLTFRTNPR HPHNEPQQYP QQYPLILYGL RHGTSVANEW 
MTGPNAWGAS TFRDDVTLRD APLSDAGRAQ ARQLANTLEL SNAVPPPTSS LSPSCSRAEL
ENVQLVVVSP LRRCLETYDA VSPRLRRNDG SPGPPVIVQP WAAERVFTVA DQGTPGTALR
NRYPDWDWSL VTDQPWWYDH HHDNNSNNNN NNHQLDATPY VEWRPSQQGQ WYAVPGEPEN
VFAARMRRLE QWLRARPERH ILIVTHWAVL RHWTGQEIDN CGIGKIEWRR DESTDP