Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46353 |
Symbol | |
ID | 7201900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 90980 |
End bp | 92019 |
Gene Length | 1040 bp |
Protein Length | 296 aa |
Translation table | |
GC content | 60% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180752 |
Protein GI | 219120008 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTTGGTGTTG TTGGTGGTGG TTCCGAGTGG TACGTCTACG ACTCACAACG ACGCTGTTGG TTCTCGGCCT GGGTCTGTGC GTATCGTGCC ATCATCACTA CACTGCCGCC GCCGTTCCTC GTCACGGACC GTGGCATCGA TCCGGAATCA TGTCGACGTC ACCATCCACC GATACCACGG CTCCAGAGTC CCCCACTCCC ACGGACCCTG CACCACTCAC ATTCCGTACC AATCCCAGAC ACCCTCACAA CGAACCACAA CAGTACCCAC AACAGTACCC ACTAATTCTT TACGGACTGC GCCACGGCAC TTCGGTCGCC AATGAATGGA TGACCGGACC CAACGCCTGG GGTGCCTCCA CCTTTCGGGA CGACGTGACG CTCCGGGACG CGCCTCTCAG TGACGCTGGA CGAGCCCAGG CCCGGCAATT GGCCAACACT CTGGAACTAT CCAACGCTGT ACCACCACCC ACGTCATCGT TATCACCGTC GTGTTCTCGT GCGGAACTCG AAAACGTGCA ACTCGTCGTC GTGTCGCCTT TGCGGCGTTG TTTGGAAACC TACGACGCCG TGAGCCCACG GTTGCGGCGG AACGACGGAA GTCCCGGACC ACCCGTTATC GTCCAACCCT GGGCGGCCGA ACGCGTCTTT ACCGTGGCGG ATCAAGGGAC GCCAGGCACC GCTCTGCGCA ATCGCTATCC CGACTGGGAT TGGAGTCTCG TGACGGACCA GCCTTGGTGG TACGATCATC ACCACGATAA CAACAGCAAT AACAACAACA ACAACCACCA ACTCGACGCC ACCCCCTACG TCGAATGGCG TCCCTCCCAA CAAGGACAGT GGTACGCGGT TCCGGGTGAA CCCGAAAACG TCTTTGCCGC ACGCATGCGA CGGTTGGAAC AGTGGTTGCG GGCGCGGCCG GAACGACACA TTCTAATCGT CACGCACTGG GCCGTGCTGC GTCACTGGAC GGGACAAGAA ATCGACAATT GCGGCATTGG CAAAATCGAA TGGCGTCGCG ACGAGTCTAC CGACCCGTAA
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Protein sequence | MSTSPSTDTT APESPTPTDP APLTFRTNPR HPHNEPQQYP QQYPLILYGL RHGTSVANEW MTGPNAWGAS TFRDDVTLRD APLSDAGRAQ ARQLANTLEL SNAVPPPTSS LSPSCSRAEL ENVQLVVVSP LRRCLETYDA VSPRLRRNDG SPGPPVIVQP WAAERVFTVA DQGTPGTALR NRYPDWDWSL VTDQPWWYDH HHDNNSNNNN NNHQLDATPY VEWRPSQQGQ WYAVPGEPEN VFAARMRRLE QWLRARPERH ILIVTHWAVL RHWTGQEIDN CGIGKIEWRR DESTDP
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