Gene PHATRDRAFT_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_4059 
Symbol 
ID7201598 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp591539 
End bp592600 
Gene Length1062 bp 
Protein Length312 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180863 
Protein GI219120240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCTGGCGG GTCCTTCTTC CGAAGACCTC GGTTGCGACA TCGCGCACTT ACTGGGCGTA 
CCAGCGAATC GCATGGATGT TGGCCAGTTT GCCGACGGCG AAACTCGAGT CCAAGTTCAA
GACTCAGTCC GCGGCAAGAA CGTTTATATC GTAAACTCTA CTACATCGTC GGATTCTATA
ATGGAGTTAT TGCTGCTGAT TTCTACGTTA AGAAGGGCGA GTGCCAAACG GATAATAGCA
GTGGTCCCGT ACTATGGATA TTGTCGACAA GACGAGCGTA GGCAAGCGCG ACAACCGATT
GCCGCCAAAG ACATGGCACT CATGATGGAA GAAATGGGAG TTGATCGGGT CATTTGTATG
GATCTACATA ATGACTCTCT TCGTGGTTTT TTCTCTCCTT CCGTCCCCGT TGAAGTACGT
CAACGACACG AGCAATTCTA TTTCGCCGGA TTCGTTTCCG CTTTAAATTA TCTCAATCCG
CCACTTCTTT TGTTTTAGCA CTTAATGCCT GTTCCCGTTG CGGCCGCTTA CTTTCACGAG
GAATTGAGTG CTGGAGTGGA ACAGAAGAAT GAAGCATTTC CTAAGGTGAC AATTGTTGCT
TCTCATGAAG GGCAAGTCGG CCGAGCGACA CAATTTCGAT CCGTCTTACA ACGCCTTTCA
GGAGAGAATA TTGAACTGGC CGTTCTGTCG AAATCTCGCA TGAGACCGGG CGAAAAGCAG
TACGAACCGA AATTGGTAGG CAATGTGAAG GGACGGAAAT GTATCCTGGT GGACGATATC
GTCAACACGG GTACCACGTT GGTGAGTAAC GTGCAAATGT TGAAGCAGGA AGGGGCGGAT
AGTATCTACG CATGGGCTAC CCACGGCGTT TTTGGTGCCA GTGAGCTCAA CGATGCACCG
GAAAGATTGC AAGAACTACA AGATCTCGAT TACTTGTTAG TGAGCAACTC AGTCAGCAAC
CCGAGATCGT TGCCGTCCAA GATTCGCCTT TTAAACGTAG CGCCCTTGCT AGCTGAAGCC
ATTGCCCGGG CGCTTCATGA CCAATCTATT AGTGGTATTT TG
 
Protein sequence
LLAGPSSEDL GCDIAHLLGV PANRMDVGQF ADGETRVQVQ DSVRGKNVYI VNSTTSSDSI 
MELLLLISTL RRASAKRIIA VVPYYGYCRQ DERRQARQPI AAKDMALMME EMGVDRVICM
DLHNDSLRGF FSPSVPVEEL SAGVEQKNEA FPKVTIVASH EGQVGRATQF RSVLQRLSGE
NIELAVLSKS RMRPGEKQYE PKLVGNVKGR KCILVDDIVN TGTTLVSNVQ MLKQEGADSI
YAWATHGVFG ASELNDAPER LQELQDLDYL LVSNSVSNPR SLPSKIRLLN VAPLLAEAIA
RALHDQSISG IL