Gene PHATRDRAFT_20857 details

Gene Information

• Locus tag: PHATRDRAFT_20857
• ID: 7201595
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: -
• Start bp: 573788
• End bp: 576009
• Gene Length: 2222 bp
• Protein Length: 687 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002181030
• Protein GI: 219120589

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.821409
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTTGCCCAA AGCAGCAATC GAAACCACAC TAACTGTGCA TGCACTGTGC CTTTGCCCAT 
ACCGCTAACC CTTCTTTTGT CTTCTCTTTC ACATGCCGAG TCCGTCCCCT GAAAAGTCAC 
GCAGTGGTCA AACCGAAGAA GAACGCCTGC GTGAGGTGTT ACGAGCGAAA CGGAAGAGCC 
GCCGCGAAAG CAAGGGAGAC AACGGCGACC GCGACGCTCA GCACGACACC GACCGAACGA 
AATCCCAGAG TCCATCGGAA AAGATCAAAT CTACAGATCG GGAATCTGCC AGATCTCCTG 
AAAATCTTGA TCGATCGCAA CCAGCAAACT CGAATGGGCA CGCGGAACCG CAATCGAACA 
CTCAACGATC CCGTTCTCCC GATCACCGGC GTGAACGCCG TCCCAGCAAC GACCGACCGT 
CCCTCGATCG CAGTCGCGGA TCTCGCGACG AACGCCGTCG TCCTCGTCGG CACCATCATC 
GGGATAATTC CCGTCATGGA AGCAATCCTA GTCGCGGTCC TCCAGGGTCC CGGGCGCACG 
ATCCATACTA TCCACCGCGT AGGGGTGGAG GGCTTGCTGC CAACGGTGCG CCCATGCGGG 
GACCGCCTCC TCCACACCAC TGGCGGGGTC CGCCTTCTTC GGGACCTCCA GCTTCCCGAC 
ATCGCCATCG GGATTTGGCC GCTTTGGATC GCTACGACGA CTTTGGACGT CGTCGGCCAC 
CGTCGCGGCG CTCACGCAGT CGGTCCGTCA GTCGCAGTAG TAGTGGAACG AGTAGCGGCT 
ACTCGTCTCG CTCCCGATCG CGCAGTCACA GCCGCTCGCG CAGTCGCGAT CGCCGTCCTC 
GTAGACAGCG TGGGGGGTCG TCGCGAAACC GTCGTCGTTC CCACAGTGCT TCGTCACGAT 
CTTCGTACGA CTCCTCCGGA TCTTCGTCGT CGTCGTCATC ATCTTCGGGA GACAGTTCGA 
CGACTTCGGA CGTGGAACAC GCAACGCAAG TAGACAACAC GTACACGAAA GATCAACGTA 
CCGTCTTTGT CACGCAGTTG GTGCAACGCA CGCAAGAACG GGATCTCAAA AAGTTTTTCA 
CGCGCAAGGG CTGCAAAGTC AACGAAGTCA TCTTGTTGCG CGACAAGCGT ACCGGCAAGC 
ACAAAGGGTG TGCTTACGTC GAGATGAAAC GAATGGAGGA TGTCTCAATT GCGGTGGGAT 
TATCAGCGGA AGTTCCGGAT TTTCAGCGAT TCCCGGTGCT CGTCAAGGCC TCGGAAGCCG 
AAAAGAATTA TCTGGCCAAC GCGAGTACGG CGACGTCGAC GGCGGCGCAA ATGGGAGTTC 
CCATCAAGTC GGCTCCTCTG CTTGGGCCCG ACGGAAAAAT GCTGGAAGCA CAAAAGGTAT 
ATATTGGCAG TTTGGATCCC AGTGTCTCTC AAGAGCATCT CTTTGCCCTG TTTAGTCAGT 
TTGGTCAACT CGAAAAAGTC ACTTTGCAAA TGGACTCTAA CACGGGCCTA TCCAAAGGTT 
TTGCCTTCTT GACCTTTCAC GATCCCAAGG AAGCGAATCT GGCCATTCAA ACCATGGCCA 
ACCAAGCACT TGCGGGCCGT CCCATGAAGA CAGGTTGGGC GAGTCAAGGA TCTTCCATTC 
CGGGTGTTGA AGTAGTGACG TCGGACGAAT TTCCCGCTGA CGCAAGCACC CGAGCACAAC 
GGGCCTATCA GGTGTTGGCG CAGTTGACCA TGGGCGTTCC TGTTGCTTCC GTAGGTCAAG 
CACCAGGAAC AAGCTCGTTC GCGGCTGCCG CTGCCGTACC CGGAGGTGCC TCGCGAATCC 
CTACAGTCGC GGAAGCCCGG GCGAGTCTAG CCGGAGCTGT TGCCATGGCA CCGGCCACGC 
CTGCAGTGTT AGTGCCCACT CCGGCAGTGG CTCCTTTGGG ATCACCGGAC GCCAAGATTG 
TTGGCAATGC GGATACGCCC ACCAAGAATG TTTTGATCCG TAACATGTTT GACAAGGACA 
AAGAAACGGA TCCTGGTTGG GAAAAGGACA TCAAGGAAGA GTTTGAAGAT GAGTGTTCCA 
AGTATGGGAC GATCACGTCC GTGACGGTTA TGCATATGGA GCCGGGTGGT AAGATTTACG 
CTTCATTTGA TTCCGTCATC GGAGCTCAAA AATGTGCTTC CAGTTTAGCA GGTCGGTGGT 
TCGACAAGCG CCAATTGCGC GTGGATTTTG TCGCTGACAA AGATTTACCG AAGGACGACT 
AG 

 

Protein sequence

MPSPSPEKSR SGQTEEERLR EVLRAKRKSR RESKGDNGDR DAQHDTDRTK SQSPSEKIKS 
TDRESARSPE NLDRSQPANS NGHAEPQSNT QRSRSPDHRR ERRPSNDRPS LDRSRGSRDE 
RRRPRRHHHR DNSRHGSNPS RGPPGSRAHD PYYPPRRGGG LAANGAPMRG PPPPHHWRGP 
PSSGPPASRH RHRDLAALDR YDDFGRRRPP SRRSRSRSVS RSSSGTSSGY SSRSRSRSHS 
RSRSRDRRPR RQRGGSSRNR RRSHNSSTTS DVEHATQVDN TYTKDQRTVF VTQLVQRTQE 
RDLKKFFTRK GCKVNEVILL RDKRTGKHKG CAYVEMKRME DVSIAVGLSA EVPDFQRFPV 
LVKASEAEKN YLANASTATS TAAQMGVPIK SAPLLGPDGK MLEAQKVYIG SLDPSVSQEH 
LFALFSQFGQ LEKVTLQMDS NTGLSKGFAF LTFHDPKEAN LAIQTMANQA LAGRPMKTGW 
ASQGSSIPGV EVVTSDEFPA DASTRAQRAY QVLAQLTMGV PVASVGQAPG TSSFAAAAAV 
PGGASRIPTV AEARASLAGA VAMAPATPAV LVPTPAVAPL GSPDAKIVGN ADTPTKNVLI 
RNMFDKDKET DPGWEKDIKE EFEDECSKYG TITSVTVMHM EPGGKIYASF DSVIGAQKCA 
SSLAGRWFDK RQLRVDFVAD KDLPKDD