Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13160 |
Symbol | |
ID | 7201623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 88107 |
End bp | 89048 |
Gene Length | 942 bp |
Protein Length | 314 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180940 |
Protein GI | 219120402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCTTTT GCGACGACAT TCTCGTACAC GTGTCCCGCT CCTTCGCTGC CGTCATTCGG CAATTGCCCG ACCGACTCCT CGTCGATATT CTCGTCTTTT ACCTCGTCCT GCGCGCGCTC GACACGATCG AAGACGACAC GACGGCATTC GCCTCGCCCG AAGAAAAAAT CGACTATCTC CTGAACTTTC ACCGGACGGC CTTGGCCGAT CCGGACTGGA ATTTGCAACA CGTGGGGCAG GGCGACGAAC GCCGCTTGTT GCAGCAGTTC CCCCAGTGCC ACCGTGTCTA CGCCAAGCTC GCCGCACCCT CGCGACGCGT CGTCGCCGAC GTGACGGCCC GCATGGCCAC CGGGATGGCC GAATTCGTCC GCAAGGATCT CGGACAGGGC ACCACCAACA CCGAACAGTA CAATCGCTAC TGCCACTTTG TCGCCGGACT CGTCGGGGAA GGACTCTCCC GACTCTTCGC CGCGTCCGGA CTCGAAGCCG GATCCTTCGC CGGCGAATTG CACCTTTCCG ATCAAATGGG ACTCTTTTTG CAAAAGACCA ACATTATTCG GGATTATTTG GAAGATTACG TCGATCAACG CGCCTTTTGG CCGCAGTCGG TGTGGAAAAA ATACGCCGCT ACGGACGATT TGGGGTACTT TGCGCAATCG ATTGGCACGG ACGACGGTCG CGACCGGGCC TTGGGATGTC TGAACGAACT GGTGACGGAC GCCTTGGAAC TCGTACCCGA CTGTCTGACC TACCTCGCGC GCTTGCAGTG CCAGGAAATT TTTCGTTTCT GCGCCATTCC ACAAGTCATG GCCATTGCTA CTCTGGACAA GTGCTACCAC AACGTTAACG TCTTTACCGG AGTCGTCAAA ATTCGCAAGG GACTGTCCTG CAAATTGCTA CTCCGGACCA ACACTCTGTC CCAAGTCCAC GAAACCTTTT AC
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Protein sequence | LAFCDDILVH VSRSFAAVIR QLPDRLLVDI LVFYLVLRAL DTIEDDTTAF ASPEEKIDYL LNFHRTALAD PDWNLQHVGQ GDERRLLQQF PQCHRVYAKL AAPSRRVVAD VTARMATGMA EFVRKDLGQG TTNTEQYNRY CHFVAGLVGE GLSRLFAASG LEAGSFAGEL HLSDQMGLFL QKTNIIRDYL EDYVDQRAFW PQSVWKKYAA TDDLGYFAQS IGTDDGRDRA LGCLNELVTD ALELVPDCLT YLARLQCQEI FRFCAIPQVM AIATLDKCYH NVNVFTGVVK IRKGLSCKLL LRTNTLSQVH ETFY
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