Gene PHATRDRAFT_5702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5702 
Symbol 
ID7201443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand+ 
Start bp280485 
End bp281165 
Gene Length681 bp 
Protein Length227 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180405 
Protein GI219119283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCG CTGCCCTAGT TTCTGGCGGG AAAGACTCCC TATACTCCAT TCTGGAATGC 
CAACGCCAGG GCCATGAGCT TGTTGCTTGT GTCCATTTGG GTCGGCCGGA CGACGAAACA 
GAGGAATCTT TCATGTACCA AACGGCAGCT TCGGAAGTGA TTAAAACGCT GGTAGAAGAA 
TGTCTTGGTG TACCGTTGAT CTTGCATGTA CGAACTGGAC TTAGCGTCAA CACAGCACTG 
GTGTATGAAG CTACTGATCA CGACGAAGTC GAAGACTTGT GTTTGGCGTT GCAGACGACA 
CTGGCACGCT TTCCCAACAT TCAGGGAGTG AGCTCGGGCG CAATTCTATC CACCTATCAG 
CGAACTCGAG TTGAGTCAGT CTGTAGTCGT TTGGGCCTAA CTTCCCTTTC TTATTTGTGG 
AGACGGGCCC CGCAAAGAGA ACTTTTGGCC CGCATGATTG ATGATGGTAT CGATGCAGTA 
CTCGTCAAGA CTGCGGCTCC TCCTGGTCTA ATGCCACGGA AACATTTGGG AAAGACTTTG 
GCAGAACTTC AAAGTCACTT CCATACGCTT CACAATCGTT TCCAGTTTCA CATTTGTGGT 
GAAGGAGGGG AGTATGAGAC GCTCGTTTTG GATTGTCCAT TTTACAAGAA GCGGCTTGTT 
TTGGATGCGA CTGAGGTCAT T
 
Protein sequence
MKFAALVSGG KDSLYSILEC QRQGHELVAC VHLGRPDDET EESFMYQTAA SEVIKTLVEE 
CLGVPLILHV RTGLSVNTAL VYEATDHDEV EDLCLALQTT LARFPNIQGV SSGAILSTYQ 
RTRVESVCSR LGLTSLSYLW RRAPQRELLA RMIDDGIDAV LVKTAAPPGL MPRKHLGKTL 
AELQSHFHTL HNRFQFHICG EGGEYETLVL DCPFYKKRLV LDATEVI