Gene PHATRDRAFT_54547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54547 
Symbol 
ID7201478 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp786883 
End bp790225 
Gene Length3343 bp 
Protein Length900 aa 
Translation table 
GC content47% 
IMG OID 
Productprotein kinase 
Protein accessionXP_002180513 
Protein GI219119508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAAAGCGGA AGATACATCA CCAAGAGCGA AAATCGAACT GTCACGTCGT CGACAACTGA 
GGGAAACTCA TTTGAAGGCG TTCCGCTCAA CTGGGCCGAT GTTCCTCTTG TTGGCAGGGA
AAAAGAGGAG CGGACTATTC GGAACGTACT TTGCAAAAAC CGACAAAAAC AAGCAAAATC
TGAAGCCATC TTTATCCATG GATCCTCTGG TACCGGAAAG TCGTCTCTGG TTCGTGCTGT
CTTGTTGTCT GAACAGGAGA GAGGGCAAGA GTTCTGGGTG TCCGGAAAGT ATGCACAAAG
TGACGGCTTA TCGAGACCAT TCAGCGCCGT CATTGACGCC GCAACAGAAC TCTGTCACAC
AGTACGTGAT TCATCGGAAT CGGTATCGAT TAGAAACAAC ATTCGAAGCA ACTTGACGGA
CGACGAGTTA CAAATCTTAT GTGCTGTCGT TCCCATGATT GGATTTCTGT TGCCAAATTC
TACGGATCAG ATCAATCCAA CGTATGGTGT TGTAAATGAG TCAACTTTGA TCCGCTTCAT
GAGTCTTTTT CGCGCTTTTC TCGCTGCAAT ATGCTCACCT TCACATCCCA TCGTACTCTT
TCTTGACGAC CTACAATGGG CCGATGATGC ATCAAGGAAG CTGCTGTCGT CTTTTTTCAT
GGATCTCGAT CTCGAAAATT TCTTGTTCAT CGGAATTGTC AGGGACGGTG AAGAGACTAC
GTTTGATCCG CCGGCAGACA CTCTGATTCC GTGTCATCAG CTCGTTTGTG GATCGTTAAT
TGAGTCAAAT GTCAACAAAA TTGTTGCTGT GGCAACTGGT TTGAAGGAAG AGGAAACAAA
GCAATTGGGG TGGATAGTCT TTCGAAGAAC GTACGGAAAT CCTTTTTTCG TCAAGCAGTT
CCTTGAGTCA CTCCATCGGG AGGAGCTGAT TTCTTACAAT GCTAAAGACG AACGATTTGA
TTGGGATGTT GATATAATTG CGAAAAGAAT GAGCCCCTCC TCCAACGTCG TGGACCTTCT
CGTTGACGAA ATTTCGTCGT TGCCCCGCGA CTCGCAACTG GTGTTAGTGA TTGCCTCAAC
GCTCGGATAC ACTTTCGACG CAAGCGTTTT GGAAACAATT CTGGAATCAG TAGATTTAAT
GAGTCTTTTT CCCCGCAAAC TTCTCCTCGA CGAAGAAAAT GCAGCTGCGG ATCCTGTCGA
AGCTCCATTA CTTCAGAGCC ATGATGCCTT CTGCAACGTG AACCTTCAGA AGTCTCTACG
CAAAGCATCC AAAGCAGGTT TGATTCAACA GATATATCCA GGCAAATACA AATTCACTCA
CGATCGTGTC CAGCAGTCCG CCACTCGCCT TCTCCCTGGT GGGCGGAGAG GAGAGCGCAT
CAAGTCTAAT CTTGGTTTGC TTGTCCTGGA ATTGAGTCGC TCAAACAAGT CAGAGGACTG
GATGCTTTTT ACAGCAACCA ATCTACTCCT CGAGAATTCA ATCGATATTG ACAACGACAA
GGTAGCCAAG CTCTGTCTAG AAGCTGCTAA AAAAGCTTCG TTGCAAGCAG CTTTCAAATC
TTCGGCCACG TACGCAGATT CCGGTCTGAA GAAACTTGGA AGCAGCGGCT GGAAAAGCAA
CTACGAGCTG TGTTTAGACT TGTGTAGTCT CTCGGCAGAA ATGCACTATT CAAATGGTAA
CCTGAAGTCA ACGAAAAAAC GTGTCAAAAT CATCGAAAAG AAAGCCTCCA AGGCAGAGGA
CAGATTTCGG GCGTACAATG TACTCATTGA TATGCTCTTT TCGGAAGACG ACTTTTCTGG
ATGTATTGAG GAAGGTCAGC GTGGAATGGA ATATCTTGGA GTAAAGACAC CAAAGAATCC
CGGTCTTCTC AACGTCGCGT CCAACCTTTT GAAGTGCAAA AGGCTGCTAG CCGGACGAAA
AGCTTCCGAT TTGAGCTCAT TGCCGACAAT GGATAACGCT ACCGTAGAGG AAGTCTTACG
CCTGATGTCC ACGACAGCAA TGGCTTCATG GCACAATGGC GACAACAATC ATTGCGTTGT
ATTGTGCTTA ATCATGTTTC AAACAACTCT CAAGCACGGT ATTTCTGTAC ATGCGCCGTA
CGCTTTGGTG GCCTACGCTG TATGCCTTTC CCACTTAGGT GAGATGAAGG AGGCCGTAGA
ATATGGAACG GCGGCTTTAC AATTGCTCAA ACTACCAGGG ATGGAGCCAG CTGTTGCGAA
AACTTTGGTT GTTGTACATT CCTTTCTGTG GCATCTTAAA TTTCCTATGC GAGAAAGTTC
AGCAGAGCTC ACCAAAGCGT ATGAAGTGGG TGTGAAAGCG GCGGATTCAC TTCAATCATG
TATGGCTTTG CGTGTTGCTG GAGCGCTCGG AATTTTTGTC GGGGCAAAGT CCTTGCCGGA
GCACGAAAGG TATGTGGGAA ATGATTCAAA GTAGACTGGG GCGTTGAGCT CTGTACTAAC
ACTTTCCTTC GCAGCGTCGT ACAAAAGTTT TGTGTTACCT TGCGAGAGTA CAAGCAATCC
GGCGTACTGA AGATGCTGCT TCCATGGGCT CAGCTGATAG AAAATCTCCG CGGAAATGCG
GAGTTGTCGA CTGTTCTCCG AGGCACCTTT GCCGACGAGA CTGCTATTGT TGAGCAGTTC
AATTCTTCTT CTGCAAACGA GGTCAACCAC AGACATGCCG CGCTTGCTAC TCACTATGCT
CGCATGGTGC TGCTCTATCT TTGCGGTGAA CACCAGCTCG CCGAACTTGA CCGCAAGAAA
TACTCTAAGG TTGAAGGCGA AATGTCGACT TACGTGCAAA AACTTTTCCA TTTCGTTTTT
GCGGCTCTCA ATTGTTTCGC TTTGGCTCGT GAAAGCAGTA AAAAAGCACA CATCAGCAAG
GCAAAAAAAT ACATGAGTCT AGCCAAGCCG TACGTAAAGG AGGGATCTAC GAGCGTTCTC
GCTTTGATGG CTCTACTCGA GGCGGAACTT TTGGCGGCAC ACAAGAAGTA TAGCCCAGCG
AACGACCAAT ACAAACGCGC AATGAAGATG TTGAAACGAG AAGATTTTCA GCTACTGCAC
GGTATTGCGA TGGAGCGAGC AGCATTGTGC CTCTTCGACA GTGGGAAAAA GAAAGACGGG
GAGGTCTACT TGAAGCGGTC CTGGCGCAAA TTTGAAGAGT ATGGCGCTAA GGTCAAACTG
GAACAAATGG AAAAATTACA CGGTAGCATG GTTCACCTCT AGGTTTTCCT ATTGATGTGA
TCGAACTCTT CCGTCGATAG GTTTACATTC GAGAATGTAA CGGGGAAATA AAAATGAAAT
TCGCGATGGA CGATAATTAA TAGTACGTCA AAATTCATAT TTC
 
Protein sequence
MIGFLLPNST DQINPTYGVV NESTLIRFMS LFRAFLAAIC SPSHPIVLFL DDLQWADDAS 
RKLLSSFFMD LDLENFLFIG IVRDGEETTF DPPADTLIPC HQLVCGSLIE SNVNKIVAVA
TGLKEEETKQ LGWIVFRRTY GNPFFVKQFL ESLHREELIS YNAKDERFDW DVDIIAKRMS
PSSNVVDLLV DEISSLPRDS QLVLVIASTL GYTFDASVLE TILESVDLMS LFPRKLLLDE
ENAAADPVEA PLLQSHDAFC NVNLQKSLRK ASKAGLIQQI YPGKYKFTHD RVQQSATRLL
PGGRRGERIK SNLGLLVLEL SRSNKSEDWM LFTATNLLLE NSIDIDNDKV AKLCLEAAKK
ASLQAAFKSS ATYADSGLKK LGSSGWKSNY ELCLDLCSLS AEMHYSNGNL KSTKKRVKII
EKKASKAEDR FRAYNVLIDM LFSEDDFSGC IEEGQRGMEY LGVKTPKNPG LLNVASNLLK
CKRLLAGRKA SDLSSLPTMD NATVEEVLRL MSTTAMASWH NGDNNHCVVL CLIMFQTTLK
HGISVHAPYA LVAYAVCLSH LGEMKEAVEY GTAALQLLKL PGMEPAVAKT LVVVHSFLWH
LKFPMRESSA ELTKAYEVGV KAADSLQSCM ALRVAGALGI FVGAKSLPEH ESVVQKFCVT
LREYKQSGVL KMLLPWAQLI ENLRGNAELS TVLRGTFADE TAIVEQFNSS SANEVNHRHA
ALATHYARMV LLYLCGEHQL AELDRKKYSK VEGEMSTYVQ KLFHFVFAAL NCFALARESS
KKAHISKAKK YMSLAKPYVK EGSTSVLALM ALLEAELLAA HKKYSPANDQ YKRAMKMLKR
EDFQLLHGIA MERAALCLFD SGKKKDGEVY LKRSWRKFEE YGAKVKLEQM EKLHGSMVHL