Gene PHATRDRAFT_46280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46280 
SymbolTrx-f 
ID7201216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand+ 
Start bp802194 
End bp802979 
Gene Length786 bp 
Protein Length174 aa 
Translation table 
GC content53% 
IMG OID 
Productthioredoxin f 
Protein accessionXP_002180517 
Protein GI219119516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.767302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTCATACGA AACCGCAACG GTATACATAT CCATCCATAC ACAGTCACTG TCCATTTCCA 
TTCTCCATCT CCCTACCCAT CCATCCTTCA CTGTCGTAGT CCACTTACCT ATTCGATACA 
ATGATGCAAC AACAACAACA ACAACAACAC GCAGCACAAC GACGAGCGGG GGTCGGAACT 
ATCCTACTGT CGCTTTGGTT CGTCCCGGCG GCGACTGCCT TTGCACCCTC CACTCCTCTC 
GCGTTCCGAA CGCAGACACC CGTCGTCACG ACTATTGCCA AAGTAGCACG CACGCCTTTG 
ACCTTGTCGG CGGTTGTGGA CATTGGTTCG GAAAGTGCCT TTGACCAGAC GATTGCCAGT 
GCGGGTGGGA GTCTCGTCGT GGTCGACTAC AGCACCACCT GGTGCGGACC CTGCAAGGTC 
ATTGCTCCCA AGTTTGAAGA ACTTTCGGAA AAGTACGGCG ACGCCGTCTT TCTCAAGGTC 
ATTGGAGACG CCTCCCCCGA CGCGTCCAAA CTGATGAAAC GGGAAGGCGT CCGCTCCGTA 
CCCAGTTTTC ACTACTTCAA AAATGGTGAG AAAGTGGACG TCGTCAACGG TGCCAATGCG 
GAAGCCATCG AAGCGGCTAT TGCCAAACAC GGTGCGGAGC GTTAGGATCG GGTGCGACGA 
TGCATGCACG AAACCAATCT ACCAAATCAC GCACGCACAC ACACACAAAA AGTAGGAACG 
TTGCGTAGGA TACGGATGCT ACGCAATCCA CGTAAAAACA GTTCTTAAAG ACAATCACGT 
ACACGT
 
Protein sequence
MMQQQQQQQH AAQRRAGVGT ILLSLWFVPA ATAFAPSTPL AFRTQTPVVT TIAKVARTPL 
TLSAVVDIGS ESAFDQTIAS AGGSLVVVDY STTWCGPCKV IAPKFEELSE KYGDAVFLKV 
IGDASPDASK LMKREGVRSV PSFHYFKNGE KVDVVNGANA EAIEAAIAKH GAER