Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46231 |
Symbol | |
ID | 7201192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 673476 |
End bp | 675412 |
Gene Length | 1937 bp |
Protein Length | 557 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180484 |
Protein GI | 219119447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATGTGCTAT GCCCCAACGA GAACGTATAT AAGCCTCAAC GACTTTTCCA AGACTTTAGT TGGCAACCCC TTCCGTTGAG AACGACTTCC GTGTCCCGCT TCGCACAACG ATGGAAAGTT CGTGATCTCG CCACTAGAAT ATGAAAAAAA GAACGAGCGC AACAATAAAA AGGGAATAGT AAAGCAAACA AAGCAAAAAG AGAAGTTGCA ATGAGTGTAA GTGCGAAGGA AAGTTCCGGA AAGTGGACTG TAGGCGACCC GAAACTTGAT AGCGAAAGCC AACGGGGCAG CAGCAACGGT CTTCAAGAAA AGTATGAAGC GCATGGTTCA CATCCACGAG GTCTTTTGAT GGCAAGTACA TCCGAAGATT CAAGCCCGCC AGCAGAAATC TTACAGCAAC TTCAGAAAGT TTCCTGCTCG GTGTCGGTGT CGTTATCGTC GTCGCCTTCT ATCCCACTGG AAAAATTTCC AAATCAAACT CAAGAGCAAA CGATCTTCCA AGAAGAGGAG CTCACAGTCA GTGCGTGTGG CGATCGGCAT AACGGCTTCA TAAATACAGA TATTCAAAAA GACCCAATTA CTTTACAGTC GGAAGATTCT GTTTCGCAGC CAGCGAAATC GAAAAAAAAA CGAGAGAAAT CCATTGAGAG ACAGTCAATC TATCCGGACA TCTCTTGTTC GCCCCTGCCT ACTGGAGCTC CGGCACGTGT TGCCGGGCCT CGCCGACACC GCCGAACGAA AAGTGACACT TCCAGCAACC TGACTACTAT TATGGAGAGG CCGCTTTCTC CACTGGAAAG CATGAGGGTT CGAACCTCAT CGCCCGACTC GGTGCTGACA GCAATTCCAG AGCATGGACG GTGTCTGTCG CCGACAAGTG CCGTAAGTGT CATGCCCATT TTCCAGCCAA CGTCGCCGAA CTTGGAGACC TCAGCAATAT TGGCTCCCCT GATCCTCCCC CCACTCGCAC CTAGTAGTGA ACATTCAAAT GCTTACAGCA GCGGTTCTGC GTGCTATACA AAAAGCAGAA ATGGATCCTT AGGATCCAGG CCTCGAGTTG TCAATCGACA CCGACGAGTT AAATCTGCAG GGACCCATCA GCTTGTGGCG TTGGACACAG AAAGCTTGCT GATTTCCCAA CTCCAAGATT TGCACGCTCG TCACGGAACT CAGCACGCCA AGCTTTCCTT GACATACAAC GTCCTTGGGA ACGTCTACTT CCGACAGCAA CGCTTCGAAG CAGCAATCGA AACTTACCGG AAAGCCATTG TAGCTGCACA GGAGAAAGAC AAGGTGCCAT TGGCCGACTC GTATAGTAAT CTTGGTACCG TGTATTGGTC GACAGGAAAT GTGGATCAAG CCATTGAGTG TTTGCAACAA GGATTGAGAC TCCGACTGCA ACAGGGCAAT GTCTTAGCGA TTGCTACCAT CCACTACCAA CTCGGTTTGG TCTATACCCT GCGGGGCACG TTCGACGAGG CTTTGCATCA ATTTATATCG TGTATCACAG AACGAGGGGG AAAAAGTGGC CAAGAACTCG AAATAGCCCG TTCGTATGAT GCGATGGGCA AAGTCTATAC GTTACGCGGC AACTTCGAGG AAGCTCTTGA GTCCTATGAT CATGCGATTC GCCTCAAAGA GAGGAGGGGA GCTTCAACGG TCTCCACCTT AGAAGAAGTT GGCCGTGTTC AACACACTAC GGGAGATTTA CAAGCTTCGT TATCAACTTT CCAAAGTGTT TTTGATATGC TTAAACAAGA AGTTGTTGAA ATGGGACTGA GCTCGTCCAA GCAAGCCCAA ATGAGCGATA CTCGCAGCAT TATTTCGGGA ATTTCCAAAG AACTCGAGGA ATTGTCTGTT GGACGAGGCC ATTTTAATAA ATAGCACGTC TGGACAAAGG ATATCGAATC GAGGTTTAAA GGAAGTGTTT GCCTTTT
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Protein sequence | MSVSAKESSG KWTVGDPKLD SESQRGSSNG LQEKYEAHGS HPRGLLMAST SEDSSPPAEI LQQLQKVSCS VSVSLSSSPS IPLEKFPNQT QEQTIFQEEE LTVSACGDRH NGFINTDIQK DPITLQSEDS VSQPAKSKKK REKSIERQSI YPDISCSPLP TGAPARVAGP RRHRRTKSDT SSNLTTIMER PLSPLESMRV RTSSPDSVLT AIPEHGRCLS PTSAVSVMPI FQPTSPNLET SAILAPLILP PLAPSSEHSN AYSSGSACYT KSRNGSLGSR PRVVNRHRRV KSAGTHQLVA LDTESLLISQ LQDLHARHGT QHAKLSLTYN VLGNVYFRQQ RFEAAIETYR KAIVAAQEKD KVPLADSYSN LGTVYWSTGN VDQAIECLQQ GLRLRLQQGN VLAIATIHYQ LGLVYTLRGT FDEALHQFIS CITERGGKSG QELEIARSYD AMGKVYTLRG NFEEALESYD HAIRLKERRG ASTVSTLEEV GRVQHTTGDL QASLSTFQSV FDMLKQEVVE MGLSSSKQAQ MSDTRSIISG ISKELEELSV GRGHFNK
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