| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46158 |
|---|
| Symbol | |
|---|
| ID | 7201246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 440199 |
|---|
| End bp | 441688 |
|---|
| Gene Length | 1490 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180636 |
|---|
| Protein GI | 219119766 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCGTCCTGTC GGAAACAACC TTGGCCATGT AAAACGGAGA AAGAATCACC CCGTGACCAC
CAACGGAAGT ACGGGAAGGT AGTCTTTTCC ACGCGTACCT CCATTGAATC AAAAGACACC
ACAACAGATT AGCAAGCCCG CGAGGATTAT CTCGTCTCAC GATGACCGTG ATACAGGCAC
CAAAACGAAG CGGTCGGAAA GCGAGACCCA CGGTACTGCT AACGGGCTGC TTAGCGGTCA
GCTTTCTGGG CGCCGCACTG ATAGTCTTCG TAAGTCGCTA CGATGCTCCG CCTTCGTCGT
TGCCGTCGGC CGACAAAAGT GCGAATTCTC TTAGAGATGC ACCCAAGCCG TCCATGATGA
GCACCACAGC AAGGGAACAA CCGGCTGTGT CGTCGGTTAC CCGTCCCGTC GTAGAAGGTG
TCCCTACCGG GTCCTATCCC TACAAGGATA CCGCTGCCTG TGCGGGTTTG ACCAACCAAG
GTCACTCAGA ACACCAGTGT TCCATTCATT ACCCGCTCGT AATAGATAAA CAAGGCAACC
TACGGTCGGA CGACAGCAAT TCACTTTCTT CGCAATCGGA TTTCTATATC GTTACACGCA
AAGGCGATAA AGATGGTGTT TACCCCATGC CGTTGCCCAA TCAGGATCGG TTGGTTATGC
TGAATCCGGT CACGGTCTCT ACCGATCGAG AAGAGTCAGC GTCCGACAGC GTGTTTGTCA
TGCTGGCGGA TGGGCACGGT GAGTTTGGCC ACGATTGTGC AGATGTGGCT AGCAAAGAGT
TGCCGTCGCG TTTTCTGAAC GCTGTGACCG ATTCACTTCC AACGGCCGAC GACACCGAAA
CGGCAATCCG CGATGCTTTG CGAAACGCGT TTTTGCAAAC AGACGCGGGT CCACTGGAAC
CTTTTGCTGA GGCAGGGACC ACCGCCATTG CAATGTTCAA ACACAAATCC AAAGTATATT
TGGCTTCGAC GGGTGATTCC ACTGCCTTGG TCGGCAGGTA CAGCAAGGAT CACATTGTGT
CTATAGAAAA ACAAGCCGTC CATCATAAAC CGTCCGATTC AGATGAGCGC GTGCGAATCG
AAGCGGCTGG TGGGACGGTG ATTGTGCCTG CAGATCCATC CCTTACTAGC CGAGTAGTGA
TTGGAATGTC TGCTCTGGCC ATGTCTCGAT CCTTGGGTGA TACCGAAGGC AAACGAGCCG
GCTATTTGAC GGCGGAACCT AGTGTTCAAG TTCTGGATCT ATCAGAATAC GACGAAGCGG
ATACGTTTTT TCTCCTGGCG GCGACGGATG GAGTCGTGGA TTTCCTCGAC TTGAAGGAGA
TTGTCCAAGC AATCGGCCAT GCAATGTACG GCCCACCCGG GAAGGAAACT TCCAATCTAC
CCAATACCGT GAAGCGTATC ATGGAGAACG CGTCACAGCA ATGGTTTGCT CGAACAAGCG
GTACTTATCG GGATGATATG AGTTTGGCAG TGACCAAGAT TCGACGATAG
|
|---|
| Protein sequence | MTVIQAPKRS GRKARPTVLL TGCLAVSFLG AALIVFVSRY DAPPSSLPSA DKSANSLRDA
PKPSMMSTTA REQPAVSSVT RPVVEGVPTG SYPYKDTAAC AGLTNQGHSE HQCSIHYPLV
IDKQGNLRSD DSNSLSSQSD FYIVTRKGDK DGVYPMPLPN QDRLVMLNPV TVSTDREESA
SDSVFVMLAD GHGEFGHDCA DVASKELPSR FLNAVTDSLP TADDTETAIR DALRNAFLQT
DAGPLEPFAE AGTTAIAMFK HKSKVYLAST GDSTALVGRY SKDHIVSIEK QAVHHKPSDS
DERVRIEAAG GTVIVPADPS LTSRVVIGMS ALAMSRSLGD TEGKRAGYLT AEPSVQVLDL
SEYDEADTFF LLAATDGVVD FLDLKEIVQA IGHAMYGPPG KETSNLPNTV KRIMENASQQ
WFARTSGTYR DDMSLAVTKI RR
|
|---|
| |