| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46110 |
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| Symbol | |
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| ID | 7201343 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 291303 |
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| End bp | 293777 |
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| Gene Length | 2475 bp |
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| Protein Length | 718 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | core alphafucosyltransferase |
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| Protein accession | XP_002180610 |
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| Protein GI | 219119712 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGCA TACCATACGC GGTTTCATAT CTCGCATGCA GTGCTCCCTT TATCGGCAAC
CATTCCCAAT GGGAAGGTGA TCCAGTCGCA GCCATTTCAT CCGCTGTTAT CTACCATCTA
AAGCCGACTA AAGAGGAAGG AAGAATACGA GCCTGTCAAA GGCCGGTTGG CAACGAAGTG
CGGCATCCAA TTGGAAAGGT ATCTTCGATA GACGTAAAGA CTCCCACAAC ATTCCTGGAC
AGAAAGCACA CCTTGACCTC GATTAACCAT GCGCGTGTCT TTGCGACAGC CCCCACGGAT
GCACTGCCGC TGTACGTGGA GCCTTTTTCT TGTCGTGCTC TTGTGCATCG ATATCCTTTG
TATGCTCCTG CTCCATCGCA AAGCACACGT AGCCGTTGCG CCTATTCCGT GGTCGCCGCC
CACCAACAAT GCCGTACGCC CCAACACTCG GAACCGGCAC CAGAATTCAT TCGTAACGTC
TGAATTCCTC ATGCTCGGTA CCAATTCACA ATTGGAGCAA GGGCGTGATC AGCCCATGTC
TGGCAGTACC GATGGCAAGC TTGTCCACCT TACTGATTCG AATAATCCTA TGGTACTGTC
CGAAGCGTTT GTATCTGTGA TCAAGGGTTT GGAAGCATCA CTACAAATAT CGTTGAACTT
GCCTACGTTA CGATCATGCC GTTGGAAAGG AACGGATCTG ACGATACACA ATGTTTGTGA
CCAAGCCGGA TCGGAACAAA AGAACCAAAG ACCAAAGACT GTAGTTTACT ACAATCGATT
TTCCCAGGAA CGCATTATTT GCGGCCGGAG TATTCCGCCA AACACACATT TACAGTTGGA
TGAGCTGTGC GAGGAGCCGT CTCGCTTGTA TGCGGTTTTA CCCGATCGCA CGGCAAAAGG
GCTACCACCG ACCACGGTCC GCTTCAACGA TCCCCAGCGC CGCAAATCAG CGACGGAGTT
TCAGCCGTGT GACGTGCCCT GCTTTCACGC GGGTGAATAT AGGCTTGTTT CTCAACGGAC
CATTGACGGA ACCCCTTGGC GTTTTGTCTT TTCCATGGAA GGACCACACT ATTTTTCGTC
GCTTTTCTTG GATCGCTCCG CATACCAGAT TGACCGCTAT TACGCCACCA CATCTTTCCA
ATCCGATGTT CCCTTGCCGT ATTTCTCGTG GAGCGAGTAC AGTATTCAAA AGCCAATGCT
AGATTTTGAC CAAGCCATTC CGGCGGCTCT TTTTCTGGCC CAAAATTGTG ATTCACGTAA
CGATCGGGAG GGTATTGTGC GGGCTTTGCG GACGTCCTTT CGTGTTGATT CCTTGAGCAG
TTGTCTGCAC AACGCAGAGC CACCAGCCGG TGTAGATATG GACAACAAAA TTCAAATTCA
GCGTCACTAT CTGTTCTATT TAGCGTTCGA GAACCAAAAC GAAGATGGTA CGTAGAGCTG
CCATTGTTAA GAGGAAACGA GAAATACCGC GACCAGTACT CACTCGGCTA AATTTGTCGT
CTACGTTCAG ATTACATCAC AGAAAAGCTG TGGAGCGCTT TAGAATCAGG CACGCTTCCA
ATTTACTTCG GAGCACCTAA CGTTCTTGAG CACGTTCCGG AAAACTCGGT CATTAACGTA
AACGATTTTG ACAGTATCGA CGCGTTGGCT GCCTACTTGA CAAAGGTTTC CAAAGATCGG
GCTTTGTACG AATTGCACCA TGCGTGGCGA TTGCAACCAC TACCGGGAGC TTTCCATCGG
AAATACGATT TTACGAATGT CCACGGAACG TGCCGAATGT GTCGGTGGGC GGTGGCTAAA
CGTTACGGCT GGGGCTGGAA CCACGCGAAT CAAACTATTG TGGACGTCGC CGTCCCCCGA
ACCATATGCG TCGACGAACG TGGCTTGTTG CAACAGCCGC TACAGGAATC TTGGACTTTG
AAAATGAATG ATGTGGATAC GAAATTGCAG CCGCCAAAAA TTCGCTTTCA GCAGGAATCC
GCAAAGGTCA AAGACAGCTG CAACGTTGGC AGAGACACAG CAACGATTGT TGTTGGCGAG
AAGGAGGATG TATTTGAACG ATTAATTGTG GAACAAGATG GAGTGCTAGA CATATACCTG
AGAATGAGAA CAAGTGTTAA GAGCGTAAGG ACATCAAGGG AATCCGCTTT GCTGTGGCAG
TTTCGGACGC CACTCCAACA TGGTAATGCT ACCACCTTTG TCTTTCAAAC CATTGAAGAG
GGTCACATGA GATTGCAAGA CAGTACAAAT CGCATTACGT TTTTGACGTG GCCGCGCGTG
AATGTTGCGT TGGCATCATT TGTTGATGGG GGCGACCATA GAGTGATTGT TCAGGTGCCC
ATATTACCGT TGCTACGCCT AAGAGTGATT GTGGAGGACG TAGACACCTT TCATCCAGGA
GCGGCTGCCC TGGAAAATTA TTTTGGCAAA ACGATGAAGG CTGATTTTTG GAATCCTGTG
GAAACCTTCG TGTAA
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| Protein sequence | MIRIPYAVSY LACSAPFIGN HSQWEGDPVA AISSAVIYHL KPTKEEGRIR ACQRPVGNEV
RHPIGKVSSI DVKTPTTFLD RKHTLTSINH ARVFATAPTD ALPLTDGKLV HLTDSNNPMV
LSEAFVSVIK GLEASLQISL NLPTLRSCRW KGTDLTIHNV CDQAGSEQKN QRPKTVVYYN
RFSQERIICG RSIPPNTHLQ LDELCEEPSR LYAVLPDRTA KGLPPTTVRF NDPQRRKSAT
EFQPCDVPCF HAGEYRLVSQ RTIDGTPWRF VFSMEGPHYF SSLFLDRSAY QIDRYYATTS
FQSDVPLPYF SWSEYSIQKP MLDFDQAIPA ALFLAQNCDS RNDREGIVRA LRTSFRVDSL
SSCLHNAEPP AGVDMDNKIQ IQRHYLFYLA FENQNEDDYI TEKLWSALES GTLPIYFGAP
NVLEHVPENS VINVNDFDSI DALAAYLTKV SKDRALYELH HAWRLQPLPG AFHRKYDFTN
VHGTCRMCRW AVAKRYGWGW NHANQTIVDV AVPRTICVDE RGLLQQPLQE SWTLKMNDVD
TKLQPPKIRF QQESAKVKDS CNVGRDTATI VVGEKEDVFE RLIVEQDGVL DIYLRMRTSV
KSVRTSRESA LLWQFRTPLQ HGNATTFVFQ TIEEGHMRLQ DSTNRITFLT WPRVNVALAS
FVDGGDHRVI VQVPILPLLR LRVIVEDVDT FHPGAAALEN YFGKTMKADF WNPVETFV
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