Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46095 |
Symbol | CYCB1 |
ID | 7201337 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 257268 |
End bp | 259421 |
Gene Length | 2154 bp |
Protein Length | 303 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180397 |
Protein GI | 219119266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACC ATTATATTGA CATCGATATG GTACAATCCT ATATAGCTTA CTTATACACA GATTTTCGCT GGAGTAACAA GGGTTTTCTG TTTCACAGTC AATCTTTTCG GGATCCCAAA TTTTGGCTTG TAGCGGAGTT TTCGACAATC CCAGACGATT ACGGCGACCA GATTGTGAGA CTGCTATCAT CTCCAACCAG AGCCTCCACC GATTCGCCGC AAAGCAGGGC GAGCTTTCCG CACCCAGAAA ATCATTTGGG AAAGTGTGAT GATGGTTGGT GACCGTTTGC TATGTAAATT ACAAGTTTTA AAGTCTCAAT ATTAAATACA GATGTCCTCA CTAAGCACGG CTCGAGATTC AAGACAGAAT AATTATGAAT ATAATCGAGT ACTTAAACCA TCATTGACTA TCTACATGAT TGTAAGCTTT TTAAAGTTTC AAATTGCCAA TATAGCTCGC ATCGCCAACT CTGTGTACAT GACAACGACT TTTCGCTCAA TTTCAATTCA CTTTGGGGTT TGACGACACA AGTTACGGCA GTTGCCCATA CCATCGTCGA TTCTTTCTGT TGTGTTGTTC GAAGATTAAA CTTAGCTGTG CTGCCGCTTT CCATTCATAA CGTCAGCCTC CGCATCAAGC AACAATGTTC AACCGCAACC AGGACGAGCG CACTCGCGCT CGTACTGCAT TTCGCGTAAG TAGGCGAGCG CAGCCATCAC GATACCGGAT CCTTTATGTT GCAAACTTTC AGAGGCTCGC TGGGTTTCGA AATCCATAGT CCTTCCAATA GGGAGGATTC GAGCTAGTTC ATCTGAACCT CAGCTGGTTG TGGAGGAGTT GCAGAGGACG TCCAGTATTC TGAAATGCAT CCTTTCAAAT TCGAGACTCA TCGATCGTCT TCTCTACATA GGATGTCACC AACGCCAATC GAGGAAACGG TACCGGGAGG ACTGCTGTTA CTGCACCGAA ACGAACAAAT ACGGGTATCA CAACTCGGTC TATGAGCATT GAACCGCGCC ATCCCTTCGG AGGTATCCAT CCTCCGCTTG ATAACCGTAG CTCCGACACC ACTCGTTTTC AGCGAAATGC AATCGAGCCA GACCCCGATT CGTATCAAAT GCACGGCAAC GTGGACGATA TTGATGCACG TGACGAAACG GCGGGAGACG TCCTATGTGT TACCTCATAC GTGCAAGGTA TGTACACTTA CTTTCGCGAG AAGGAAGTCA CCACCGCGGT ACTACCGGTC TACATGGAAA GCCAGCCACA CATCAACGAA CGCATGCGGT CGATCTTGGT AGACTGGTTG GTGGAGGTCC ACTTGAAGTT CAAGCTCGTT CCAGAAACGT TGTACTTGAC TGTGAACATT ATCGATCGCT TTTTGCAAAT TCATAAAGTT TCGCGGCCTA AGCTTCAGCT CGTCGGTGTG ACCAGTCTGT TGATTGCGTC CAAGTACGAG GAAATCTATC CACCGGAGCT CCGCGATTTG GTGTATATAT GCGATCGAGC GTACACACGT CCAGACATCA TTGAAATGGA GGAGTGTATC CTGAAAACAC TGGGATACCA GATCACGATT CCTAGTGCAC ATGCCTTCCT GGTCCGCTAC TTGAAAGCTG GTCACGCCGA CAAGAGAATT GTTCAGCTCT CATGCTATAT TCTGGATAGT ACTCTCCAAT CGTACGATCT TTTGCGTTAT CTTCCCAGCC AGCTCGCGGC TGCAGCCGTC TTTATTGCCC GTCGGACTGT GGGACGCAAT GCCTGGAGTC CGACCCTCTT ACGTTATGCC GAGTACTGTG AAGAGGAAAT TATCACAGTT GCGCGCGACG TGCTTAGAGA AAAGTCAATC GCAAATCCTG AGCTCCGAGC GGTGAATAAA AAGTACAGCG GTCATCGATA CGGCGGAGTT GCTTCGACCG TTCTGGTATT TGACTTTTAA AAGTACCAGC AGATCGTTTA CTTCCACTTC ATTGACTCCG GATACACGGC AGGCAGCTTT GCCTTCAGTC GATATACGCC GAGAGAAGTC GCCAGCTGCA CGTTGTCCAT GTAGCCAGCC CTCTCGCTCC CAGCTTACGA TTCAATTCGT TCATAGTCAA TCATCAAGGG TCCGACAATG GTTCGGGCAC TAATTTAAAA ACCATCAACA TTAC
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Protein sequence | MTDHYIDIDM VQSYIAYLYT DFRWNPDSYQ MHGNVDDIDA RDETAGDVLC VTSYVQGMYT YFREKEVTTA VLPVYMESQP HINERMRSIL VDWLVEVHLK FKLVPETLYL TVNIIDRFLQ IHKVSRPKLQ LVGVTSLLIA SKYEEIYPPE LRDLVYICDR AYTRPDIIEM EECILKTLGY QITIPSAHAF LVRYLKAGHA DKRIVQLSCY ILDSTLQSYD LLRYLPSQLA AAAVFIARRT VGRNAWSPTL LRYAEYCEEE IITVARDVLR EKSIANPELR AVNKKYSGHR YGGVASTVLV FDF
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