Gene PHATRDRAFT_46095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46095 
SymbolCYCB1 
ID7201337 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp257268 
End bp259421 
Gene Length2154 bp 
Protein Length303 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180397 
Protein GI219119266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC ATTATATTGA CATCGATATG GTACAATCCT ATATAGCTTA CTTATACACA 
GATTTTCGCT GGAGTAACAA GGGTTTTCTG TTTCACAGTC AATCTTTTCG GGATCCCAAA
TTTTGGCTTG TAGCGGAGTT TTCGACAATC CCAGACGATT ACGGCGACCA GATTGTGAGA
CTGCTATCAT CTCCAACCAG AGCCTCCACC GATTCGCCGC AAAGCAGGGC GAGCTTTCCG
CACCCAGAAA ATCATTTGGG AAAGTGTGAT GATGGTTGGT GACCGTTTGC TATGTAAATT
ACAAGTTTTA AAGTCTCAAT ATTAAATACA GATGTCCTCA CTAAGCACGG CTCGAGATTC
AAGACAGAAT AATTATGAAT ATAATCGAGT ACTTAAACCA TCATTGACTA TCTACATGAT
TGTAAGCTTT TTAAAGTTTC AAATTGCCAA TATAGCTCGC ATCGCCAACT CTGTGTACAT
GACAACGACT TTTCGCTCAA TTTCAATTCA CTTTGGGGTT TGACGACACA AGTTACGGCA
GTTGCCCATA CCATCGTCGA TTCTTTCTGT TGTGTTGTTC GAAGATTAAA CTTAGCTGTG
CTGCCGCTTT CCATTCATAA CGTCAGCCTC CGCATCAAGC AACAATGTTC AACCGCAACC
AGGACGAGCG CACTCGCGCT CGTACTGCAT TTCGCGTAAG TAGGCGAGCG CAGCCATCAC
GATACCGGAT CCTTTATGTT GCAAACTTTC AGAGGCTCGC TGGGTTTCGA AATCCATAGT
CCTTCCAATA GGGAGGATTC GAGCTAGTTC ATCTGAACCT CAGCTGGTTG TGGAGGAGTT
GCAGAGGACG TCCAGTATTC TGAAATGCAT CCTTTCAAAT TCGAGACTCA TCGATCGTCT
TCTCTACATA GGATGTCACC AACGCCAATC GAGGAAACGG TACCGGGAGG ACTGCTGTTA
CTGCACCGAA ACGAACAAAT ACGGGTATCA CAACTCGGTC TATGAGCATT GAACCGCGCC
ATCCCTTCGG AGGTATCCAT CCTCCGCTTG ATAACCGTAG CTCCGACACC ACTCGTTTTC
AGCGAAATGC AATCGAGCCA GACCCCGATT CGTATCAAAT GCACGGCAAC GTGGACGATA
TTGATGCACG TGACGAAACG GCGGGAGACG TCCTATGTGT TACCTCATAC GTGCAAGGTA
TGTACACTTA CTTTCGCGAG AAGGAAGTCA CCACCGCGGT ACTACCGGTC TACATGGAAA
GCCAGCCACA CATCAACGAA CGCATGCGGT CGATCTTGGT AGACTGGTTG GTGGAGGTCC
ACTTGAAGTT CAAGCTCGTT CCAGAAACGT TGTACTTGAC TGTGAACATT ATCGATCGCT
TTTTGCAAAT TCATAAAGTT TCGCGGCCTA AGCTTCAGCT CGTCGGTGTG ACCAGTCTGT
TGATTGCGTC CAAGTACGAG GAAATCTATC CACCGGAGCT CCGCGATTTG GTGTATATAT
GCGATCGAGC GTACACACGT CCAGACATCA TTGAAATGGA GGAGTGTATC CTGAAAACAC
TGGGATACCA GATCACGATT CCTAGTGCAC ATGCCTTCCT GGTCCGCTAC TTGAAAGCTG
GTCACGCCGA CAAGAGAATT GTTCAGCTCT CATGCTATAT TCTGGATAGT ACTCTCCAAT
CGTACGATCT TTTGCGTTAT CTTCCCAGCC AGCTCGCGGC TGCAGCCGTC TTTATTGCCC
GTCGGACTGT GGGACGCAAT GCCTGGAGTC CGACCCTCTT ACGTTATGCC GAGTACTGTG
AAGAGGAAAT TATCACAGTT GCGCGCGACG TGCTTAGAGA AAAGTCAATC GCAAATCCTG
AGCTCCGAGC GGTGAATAAA AAGTACAGCG GTCATCGATA CGGCGGAGTT GCTTCGACCG
TTCTGGTATT TGACTTTTAA AAGTACCAGC AGATCGTTTA CTTCCACTTC ATTGACTCCG
GATACACGGC AGGCAGCTTT GCCTTCAGTC GATATACGCC GAGAGAAGTC GCCAGCTGCA
CGTTGTCCAT GTAGCCAGCC CTCTCGCTCC CAGCTTACGA TTCAATTCGT TCATAGTCAA
TCATCAAGGG TCCGACAATG GTTCGGGCAC TAATTTAAAA ACCATCAACA TTAC
 
Protein sequence
MTDHYIDIDM VQSYIAYLYT DFRWNPDSYQ MHGNVDDIDA RDETAGDVLC VTSYVQGMYT 
YFREKEVTTA VLPVYMESQP HINERMRSIL VDWLVEVHLK FKLVPETLYL TVNIIDRFLQ
IHKVSRPKLQ LVGVTSLLIA SKYEEIYPPE LRDLVYICDR AYTRPDIIEM EECILKTLGY
QITIPSAHAF LVRYLKAGHA DKRIVQLSCY ILDSTLQSYD LLRYLPSQLA AAAVFIARRT
VGRNAWSPTL LRYAEYCEEE IITVARDVLR EKSIANPELR AVNKKYSGHR YGGVASTVLV
FDF