Gene PHATRDRAFT_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3843 
Symbol 
ID7201218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp813823 
End bp814809 
Gene Length987 bp 
Protein Length329 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180712 
Protein GI219119923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACGCTACCA TCCGCTACGC GTACTTGTCC CAACGTGGCT TTTACCCCGA CGATCCCTTC 
AAGGCCAATC AGGACGCCTA CGACGTACAG ATACCCTTGT CCAACAACCA AGGCGACGCC
TTTCTCGGAA TCTTTGACGG ACACGGCAAG GATGGCGACG GCTGCGCCAT TTTTGCCAAA
CACAACCTGC ACAAGCATGT GCATGGATTC GTCAACGCAC GCAAGTCGCA AACCGCCGCC
GAACTCACCA AGGAAGAAGT GCACCACTGC ATCACCAAGG CACACGTGGA AACCAACCGC
ACGCTACGTA AGAATCCCAA GGTAGACGAT TCACTCAGTG GGACAACCGC CATTAGTGTC
TACTTCCACG GACGGCGCAA CCGTATGACC ATTGCCAACG TTGGAGACAG TCGCGCCGTT
CTGGGACAAG CCGTCACCGG GAACTTGCCG GAATCCGCCG CCCCGGCTAC GACGTCACGC
AACAACTTGA AAGCCGTGCC CTTGAGTCGG GATCAAACAC CCTACCGCAA GGATGAACGC
TCGCGGATTC GCGCCACCGG AGCCCGTGTT CTCAGTTTGG ATCAGTTGGA AGGACTTGAA
CCGATTCAAG ATATTTCCGA AAATGGCGAA GACGACGATT TCGTCCTGGG GGAAGAGCTG
GACGAAGGGG GCGACCCGCC CCGGGTGTGG AGTCCCGATG GGGACTTTCC CGGGACGGCC
TTTACCCGGT CCATCGGAGA CGCCATGGCG GAAGACTTGG GTGTCTATGC CGAACCGGAG
CTGCTCACGC GGGAAATGAC CCCGGACGAT AAGATTATTG TGCTCGCCAG TGACGGGGTG
TTCGAATTCT TGACCAACCA GTCCGTCATT GATATTTGTG CCAAGTTTAA TGATCCACTC
GAGGCCTGTC GTGCCGTCGT GGCGGAAGCG TACGAACTGT GGTTGCAATA CGAATTGCGC
ACGGATGATA TCACCATTAT TTGCATG
 
Protein sequence
NATIRYAYLS QRGFYPDDPF KANQDAYDVQ IPLSNNQGDA FLGIFDGHGK DGDGCAIFAK 
HNLHKHVHGF VNARKSQTAA ELTKEEVHHC ITKAHVETNR TLRKNPKVDD SLSGTTAISV
YFHGRRNRMT IANVGDSRAV LGQAVTGNLP ESAAPATTSR NNLKAVPLSR DQTPYRKDER
SRIRATGARV LSLDQLEGLE PIQDISENGE DDDFVLGEEL DEGGDPPRVW SPDGDFPGTA
FTRSIGDAMA EDLGVYAEPE LLTREMTPDD KIIVLASDGV FEFLTNQSVI DICAKFNDPL
EACRAVVAEA YELWLQYELR TDDITIICM