Gene PHATRDRAFT_27838 details

Gene Information

• Locus tag: PHATRDRAFT_27838
• ID: 7201503
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: -
• Start bp: 910054
• End bp: 913669
• Gene Length: 3616 bp
• Protein Length: 1040 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002180730
• Protein GI: 219119960

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGGTTTCGG TGCGTGTAGG TAAGAATGGA TCGAGAGGAA GACCTATGGA TTGGACTAGG 
ATACACACTA TCGCTGCTAC TGATGGACAG TGTAGGAATA CAGGAGACAA TGTGCTGCGA 
CGGTCGAAAG TCGGTCGTTT CGGTAGTGGG AATGCGTTTT CGTTCCCCAG TCATTTGCAC 
TGTTCACGGT ACTCTTCCTG TCCCACTTTA TACTCACATA CACGCTGACG CTCGTCGTGC 
TTGCGCCACA GATTTTTTGT TGGAATACGT ACGGGAACGA ATACATCATT ATCATGTCTT 
TGGAAGCCAA ATTTGCCGCT CTCAAGCTCG ACGACGTGGA CAGTATTGTA CAAGCCGTCC 
AGAAGGACGG GGTCGAAAAG TCGGGTCTGG CCGCCAACAT TGGTGTGTTG GCCGCTCGTT 
GCGCCTCGAG CGACGACGAC GAAGCCTTGG TGGCACTCAA AACTACCAAG ACTTTGGTGG 
AACAGTGCCC TACCGCACAA GCCTTCACCA AGGACTGTTT GACAGCTTGT AAGTAACGAC 
TCATCTTTGG CTGGTTCACA CCGGAAGCGA ATCTGTGTGG AATCTCTGCG CGACTCGCAT 
CGAACGTGCA TTCTCACGTT CCATTTCATG ACTTTTGTTG TTGGCAGGTC TGGAACAAGC 
CTTGTCCAAG AATACAGATG TCCGCAATAC CGCCGAAGAA ACGGCCTTTG CCATTTGCGA 
AAACATCAAT CCGTTCGCCA TGAAGTCTTT GCTGCCCCAG ATCTTTGCCC AGCTTCCCGT 
AGAGAAGAAG TGGCAAATCC GGGAGTTGGG ACTCAAGTGC ATCGCCAAGT TCAACAAGAC 
CGCCCCGCGC CAGTTGGGTG ATGCCCTCCC GGAGGTCATT CCCGAAGTCA CCGCCTGTAT 
GTGGGACACC AAGAAGCAGG TCAAGATTGC CGCCACCGCA GCCATGGAAG CCGCTCTCCA 
AGTTATTGGG AACCGCGATA TCGAACACAT GACGGACAAA ATTTTGGTCG CCATCACCAA 
GCCCAAGGAA GTGCCCGAAA TTATGCACAA GATGGCGGGA GTTACCTTTG TCCAATCGGT 
CGAATCACCC GCCTTGGCCA TGGTCGTGCC CCTTTTGTTG CGTGGACTAC GGGAAAAGCA 
GATTGCTACC AAGCGTCAGT CAGCCGTTAT TATCAACAAC ATGAGTAAGC TGGTCGACAA 
CCCGCTTGAC GCCGCTCCTT TCCTGCCCCT CTTGCTGCCG GCTCTACAGA CCAACGCGGA 
AAGTATTGCC GACCCCGAGG CCCGCGAAGT CACCGAACTG GCCGTGGCGC AGTTGAATCG 
ACTGAAAGGA CTCGCGGACA AGCAATTCTC CGTCCGAGGA GATATCTCCA AGCTCGAAGA 
CGAATTTAAG AAGGCTTTGG GCGCCGAAAA TGCGGAAGGA GGCCTCTTGG TCGTTATCAA 
GCAAGCCTCG ACCATTGCCA CCACAATGAT GGACTTGCAC TTTATGGAAG ATGTGCAGTG 
GACCAAGCAT GTTTCGTCGC AGTTTGTGGA CTATTTGGAT AAGGCCAAGG TGGAAGCCGG 
TATCGAAAAG GTCCGTGAAG AAGCCGAAAA GATGTTGGTC GTCCCCGAGG AAGATGAAGA 
CGAGGACGAC TCCGAGGAAC TTTGCAACTG TACCTTCACA CTCGCCTACG GTACCAAGAT 
TTTGTTGCAC AACACCAAAA TGCGCCTCAA GCGTGGTAAG CGCTACGGTC TGTTGGGACC 
CAACGATTGC GGAAAGACCA CGCTCATGCG AGCCATTGCC AATAACCAGG TCGAGGGATT 
CCCCGATACT GGTCAGGTTC GTACCGTATT CGTCGAAGCC GATATTCAGG GTGAACAGTC 
CCACTTGTCG TGTGTCGACT ACGTTCTACA CGATCCCAAG ATTGAGGCTT TGGGCATTAC 
CACGGAAGAA GTGCGCAACG TGCTCGCGAC GGTTGGTTTC ACCGAAGACG GCAAGGCCAA 
GCCTAACCAC GCCGTGTCGA CTTTGAGTGG AGGATGGCGC ATGAAATTGG CCCTGGCGCG 
TGCCATGCTT CAAAAGGCAG ATATTCTTCT GCTCGACGAA CCTACCAACC ATTTGGATGT 
CATTAACGTT GCCTGGGTGA AGACCTACCT GAACTCATTG ACCAACGTGA CGTCGATTAT 
TGTCAGTCAC GATTCCGGTC TCTTGAACGA TTGCTGCACC CACATTCTTT CTTTCGACAA 
CCTGAAGCTC AGCACTTTCA AAGGAAATCT CGACGAGTAC GTCAAGGCCC ACCCGGCTGC 
CCGTGCCTAC TTTACCTTGA GCGACTCCAA GATGAAGTTC AAGTTTCCCC AGCCGGGACC 
GATCGAGGGT GTCAAGTCCA AGGGTAAGGC CTTGATGAAG ATGGCCAACT GCACCTTCAC 
CTATCCCGTC AACGACAAGC CGACGCTTTT CGACATTACT GTGCAAGTAT CACTCAGTTC 
CCGTATCGCT TGTATTGGGG AGAACGGTGC TGGCAAGTCA ACAATGATCA AGCTATTGGT 
CGGTGAGATT GAGCCGCAAG TTGGTGACGT CTGGAAGCAC CCCAACGCTC GTGTCGCCTA 
CGTCGCACAG CACGCCTTTC ACCACATTGA ATCCCACTTG GATAAGACCC CGAACGAGTA 
CATTCGTTGG CGTTTTGCCA ACAATGGTGA AGACAAGGAG TCACTGGTCA AGGTATCTCT 
ACAATTTTCC GATGAAGAAA TTAAGCTGCA AAAGGCCCCC TTTGAGATTC AGGTGGTAGA 
CGAAGCCAGT GGAAAAATTT CGAAGATCAA GAAGGTTGTG GGTGAGCTCA TGGGAGGACG 
TAAACAGAAC AAGAGCAAAG AATACGAGTA CGAAGTCCGT TACGCCGGCT CGACCGTTGA 
CTCGGGTGAA TATTTGTCGT CGAAGATCCT CAAGAAGATG GGTTGGGAAA AGGCCATGAA 
GGCTGTCGAT CTCAAGATTG CCCAGACTGC CGGTATGTTC ATCCGTCCTT TGTCGACCAA 
GAATGTCGAA GAGCATTTGG AAGGCTGCGG GTTGGGACGT GAGTTCGGTA CCCATTACCG 
TATGTCGGCG TTGTCCGGAG GACAGAAGGT GAAGGTTGTG TTGGCTGCTG CCATGTGGAT 
GCAGCCACAC ATTGTCATTC TAGACGAGCC CACGAACTAC CTGGATCGCG AATCGCTAGG 
TGCCCTGGCT GGTGCGATTG AGGAGTTTGA TGGTGGAGTG ATCATCATCT CGCACAACAA 
CGAATTCGTT TCCAAGCTGT GTCCCGAAAC CTGGGTCATG GACGCCGGTC ACCTCGAGAC 
CAAGGGTGAC GCTGACTGGA TGTTGAAGCA GGATTCTAAG ATTTCTGATC AAATGCAGAT 
CAATACGGAC GTTACCGATG CGGCCGGTAA CAAGATCGAG ATCAAGCAGG ACAAAAAGAA 
GCTGTCCAAG AAGGAAGAGA AGGCACTCAT CAAGAAAATT AAGGCCAAGA TGAAGGCTGG 
TGAGGCCCTT GACAGTGAAG AAGAAGAACT TGCCTTTGAG AAGGAACTGG TGTAAAGCTC 
ATTTGAATTC TCTATGGGGC AGTCTGCTTT TGTAGTCCAG TGACGACTTT ATATATAGAA 
CGAACGAACG AACAAA 

 

Protein sequence

MSLEAKFAAL KLDDVDSIVQ AVQKDGVEKS GLAANIGVLA ARCASSDDDE ALVALKTTKT 
LVEQCPTAQA FTKDCLTACL EQALSKNTDV RNTAEETAFA ICENINPFAM KSLLPQIFAQ 
LPVEKKWQIR ELGLKCIAKF NKTAPRQLGD ALPEVIPEVT ACMWDTKKQV KIAATAAMEA 
ALQVIGNRDI EHMTDKILVA ITKPKEVPEI MHKMAGVTFV QSVESPALAM VVPLLLRGLR 
EKQIATKRQS AVIINNMSKL VDNPLDAAPF LPLLLPALQT NAESIADPEA REVTELAVAQ 
LNRLKGLADK QFSVRGDISK LEDEFKKALG AENAEGGLLV VIKQASTIAT TMMDLHFMED 
VQWTKHVSSQ FVDYLDKAKV EAGIEKVREE AEKMLVVPEE DEDEDDSEEL CNCTFTLAYG 
TKILLHNTKM RLKRGKRYGL LGPNDCGKTT LMRAIANNQV EGFPDTGQVR TVFVEADIQG 
EQSHLSCVDY VLHDPKIEAL GITTEEVRNV LATVGFTEDG KAKPNHAVST LSGGWRMKLA 
LARAMLQKAD ILLLDEPTNH LDVINVAWVK TYLNSLTNVT SIIVSHDSGL LNDCCTHILS 
FDNLKLSTFK GNLDEYVKAH PAARAYFTLS DSKMKFKFPQ PGPIEGVKSK GKALMKMANC 
TFTYPVNDKP TLFDITVQVS LSSRIACIGE NGAGKSTMIK LLVGEIEPQV GDVWKHPNAR 
VAYVAQHAFH HIESHLDKTP NEYIRWRFAN NGEDKESLVK VSLQFSDEEI KLQKAPFEIQ 
VVDEASGKIS KIKKVVGELM GGRKQNKSKE YEYEVRYAGS TVDSGEYLSS KILKKMGWEK 
AMKAVDLKIA QTAGMFIRPL STKNVEEHLE GCGLGREFGT HYRMSALSGG QKVKVVLAAA 
MWMQPHIVIL DEPTNYLDRE SLGALAGAIE EFDGGVIIIS HNNEFVSKLC PETWVMDAGH 
LETKGDADWM LKQDSKISDQ MQINTDVTDA AGNKIEIKQD KKKLSKKEEK ALIKKIKAKM 
KAGEALDSEE EELAFEKELV