Gene PHATRDRAFT_27735 details

Gene Information

• Locus tag: PHATRDRAFT_27735
• ID: 7201191
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: +
• Start bp: 668146
• End bp: 670329
• Gene Length: 2184 bp
• Protein Length: 538 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180482
• Protein GI: 219119443

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.326245
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTGGCCGAA ATCCTTCTTT CTTAGGCCCA AGTTAAATTT GCTTCTTGCA CCACTATTTT 
AACAATCATG GGTGAAGAAG AATACTTGAA ACAGTCGTCG CGCTTAGGGA ACTTGGATCG 
GTAAGAGGAT CGAGGACGGT TTACGTGTTC TGTGTTAATA GTTTGAAAGA TACACCAACA 
AGTATGCGTC TAACGTCCCA ACCCTTCACT CTCACACATG TACGAAATCA ACGCGGACCA 
GTCCACAAGT AGCCATCTTG GACTTTGGGT CCCAGTACTC CCACTTGATT GCCCGTCGCG 
TCCGCGAACT CCACGTTTAC TGTGAACTCT ACAGTTGCCA GGTTGACGCC GCCGAACTCG 
CCCAACACCA ACTGACGGCC GTCATTCTTT CCGGCGGTCC GAATTCCGTG TACGAAGAAG 
GCGCACCGCA TGTGTCTCCA GAGACCTGGA AACTTATTCA AGATCGACGT ATTCCCGTCC 
TCGGAATCTG CTACGGTATG CAGGAATTGG CACACGTATT TGGAGGCCGC GTGGAAGCAG 
GTCTCAAACA CGAGTACGGC AAGGCCATGG TACACCGGGT AGAAGGCTGC GATTCGCAGT 
TGTTTGCCGA CATGCCCAGC GAATTTCAAA TGTGGATGTC ACACGGAGAC AAGTTACATG 
CCGTACCGGA CGGGTTTAAA GCCGTCGGCG CGACAGCCAA CGCCGAATAC GTTGCGATTG 
AAAACTTGGC CACCCGCATG TGGGGACTCC AATTTCATCC CGAGGTCACG CACTCGCCTC 
TGGGGAAAAC GTTGCTCCGA AATTTCGTGA TCACCATTGC TGGTGCCACA CCGGATTGGG 
TCATGACGGA TTACGCACAA GAGTTTATCG AAGAAGTCCG GGCCAAGGTA GGACCGGATG 
GTCACGTTTT GGGAGCCGTC AGTGGTGGAG TGGATTCGAC TGTGGCTGCC GTACTTATGA 
CGAGGGCAAT TGGTGATCGC TTTCACGCCG TGCTCGTTGA CAACGGCTGT CTGCGCAAGG 
ACGAAGCCAG TGCCGTGCTC AAGCGGATGC GGGAAGACTG TGGCGTCAAT CTACGCTGTG 
TGGATGCGAG TGACAGGTTT TTGGATCTAC TCAAGGGAGT GACGGATCCG GAAAAGAAGC 
GAAAGATAAT TGGTGGAACA TTCATCGATG TGTTTCAGGA AGAGGCTGCA AAGATTGAAC 
GAGAAAGCGG CCCTTGTCAG TATTTACTGC AGGGAACATT GTACCCTGAT GTAATTGAGA 
GTATCTCCTA CAAGGGACCG TCGGCGACGA TCAAGACACA TCACAACGTT GGTGGCCTCC 
CAGCTTCAAT GAATTTAAAA CTAATCGAAC CGCTACGGGA ACTCTTCAAG GACGAGGTGC 
GAGAGCTCGG CATGGCCTTG GGCATTGATG AAGCTAGCGT CTGGCGGCAC CCCTTTCCCG 
GTCCAGGTCT GGCCATTCGC ATAATTGGGG AAGTAACGGC CGAACGCGTC AAAATATTGC 
AAGAAGCTGA CGCCATTATG ATTGAAGAAT TGTGGCGTTC GGGACATTAT CGTGCGATTG 
GACAAGCCTT TGTCGTTCTG TTGCCCGTTA AGTCGGTGGG GGTCATGGGC GACGGTCGCA 
CGTATGAGAA CGTCGCAGCG GTCCGTTGCG TGGAAACCAC TGACTACATG ACGGCCGACT 
TTTACCATTT GCCATACGAC GTAATGGGCA CAATGAGCTC ACGCATTATC AACGAAGTGC 
GGGGCATCAA TCGCTTGTGT TACGATATCA GTTCCAAGCC GCCAGCAACA ATTGAATGGG 
AGTAAAGAGA AGAGGTTGTT CTGTTCTTTG GTTATCGTTC CTAGACTTGA AAATCATGTG 
TTTTTCACAG CTAGGTAATA CCGATACAGG AATGGAATGG ATATATTTAG CTTTGATCCT 
GTTTCATAGC TGGAGAGGCA ACTGATACGA CTCCTTACAT TAGTTTTGAC CCTGTTACCT 
GTGTTCTGAA ATGTTGCTGG GGTTTTCTCC GTCGCCAGCC AGACGGGAGT CCATGCGCTG 
TTGTTCGTGA CAGCTGACAA CTTATTGACG CAATAGCAAA GTGCGAGGAG GAGCACTGAC 
CTACAATAGC CTCACCATAT GATTCTTTAT TGCGTACCAG AGAATTCTCA TGAATCCAGT 
ACTATAATTG ACAAAAATGC TTCG 

 

Protein sequence

MGEEEYLKQS SRLGNLDRPQ VAILDFGSQY SHLIARRVRE LHVYCELYSC QVDAAELAQH 
QLTAVILSGG PNSVYEEGAP HVSPETWKLI QDRRIPVLGI CYGMQELAHV FGGRVEAGLK 
HEYGKAMVHR VEGCDSQLFA DMPSEFQMWM SHGDKLHAVP DGFKAVGATA NAEYVAIENL 
ATRMWGLQFH PEVTHSPLGK TLLRNFVITI AGATPDWVMT DYAQEFIEEV RAKVGPDGHV 
LGAVSGGVDS TVAAVLMTRA IGDRFHAVLV DNGCLRKDEA SAVLKRMRED CGVNLRCVDA 
SDRFLDLLKG VTDPEKKRKI IGGTFIDVFQ EEAAKIERES GPCQYLLQGT LYPDVIESIS 
YKGPSATIKT HHNVGGLPAS MNLKLIEPLR ELFKDEVREL GMALGIDEAS VWRHPFPGPG 
LAIRIIGEVT AERVKILQEA DAIMIEELWR SGHYRAIGQA FVVLLPVKSV GVMGDGRTYE 
NVAAVRCVET TDYMTADFYH LPYDVMGTMS SRIINEVRGI NRLCYDISSK PPATIEWE