Gene PHATRDRAFT_27534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27534 
Symbol 
ID7201409 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp70386 
End bp71221 
Gene Length836 bp 
Protein Length210 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180562 
Protein GI219119612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGACTTAGT CACGTGCCCT ACGAATAATT TATACTTTCT CGCAGTCCTT ACGACCCTCG 
CGGCGAAGGT GCGTCATCAG AAGTAAACGG TGCTCATGAG CCGCAAGCGA CAGCCTCCAT
GTGTTTGTAC TGTTTCGATG TACTTCTTCA AGAGCTCAAG GCATGCAAGC TTCGCGGTTG
GAACAGTCCG CCTACATCAA CCCCAGCCTT TGTTGGAGCT CTATCGGATG ACCGAGTAGA
GTGTCCTATT TTTGTCACGT GGCAAAAGAG AAGAGCCCGA CGGAACCGAT ACGCTGGTGG
GGACGAGACC GATACGTACG AATTACGAGG CTGCATCGGT TCACTTACGC CCAAGCCCTT
GGTCCAGTCC GTGGCAGAGT ACGCACTCTT TAGCGCTTTG CGAGACAGGC GCTTCAACGC
TGTAACCTTG GATGAAATTC CGGACTTGTG CGTTTCTGTA TCGCTACTCG TTTGCTATGA
AGAGTGCGAA ACGTGTCTCG ATTGGACGGT CGGGGTGCAT GGTATCATTA TTAGCTGGAC
TGACGAGCTT CGAAACAGGG AATATTCTGC AACTTGTAAG TTACGGAGTG CAATACGACT
GAATATATAA ATTGCTGTTC TATTGAACTG AACAAACCTT TGCCTTTCGT TGTAATTGTA
CAGATCTACC TGACGTTGCC GAAGAGCAAG GCTGGGATCA AGCAACCAGC GTGACTTCAT
TGATTCGAAA ATCCGGTTTT CGGGGGGAGG TAACGAAGGA TCTCCTTAGC CAAATCAAAT
GCACGCGATA CCAGAGTTCC AAGCATAGCC TTTCGTTTGA CGAGTACCTG CACGAG
 
Protein sequence
MCLYCFDVLL QELKACKLRG WNSPPTSTPA FVGALSDDRV ECPIFVTWQK RRARRNRYAG 
GDETDTYELR GCIGSLTPKP LVQSVAEYAL FSALRDRRFN AVTLDEIPDL CVSVSLLVCY
EECETCLDWT VGVHGIIISW TDELRNREYS ATYLPDVAEE QGWDQATSVT SLIRKSGFRG
EVTKDLLSQI KCTRYQSSKH SLSFDEYLHE