Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27534 |
Symbol | |
ID | 7201409 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 70386 |
End bp | 71221 |
Gene Length | 836 bp |
Protein Length | 210 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180562 |
Protein GI | 219119612 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGACTTAGT CACGTGCCCT ACGAATAATT TATACTTTCT CGCAGTCCTT ACGACCCTCG CGGCGAAGGT GCGTCATCAG AAGTAAACGG TGCTCATGAG CCGCAAGCGA CAGCCTCCAT GTGTTTGTAC TGTTTCGATG TACTTCTTCA AGAGCTCAAG GCATGCAAGC TTCGCGGTTG GAACAGTCCG CCTACATCAA CCCCAGCCTT TGTTGGAGCT CTATCGGATG ACCGAGTAGA GTGTCCTATT TTTGTCACGT GGCAAAAGAG AAGAGCCCGA CGGAACCGAT ACGCTGGTGG GGACGAGACC GATACGTACG AATTACGAGG CTGCATCGGT TCACTTACGC CCAAGCCCTT GGTCCAGTCC GTGGCAGAGT ACGCACTCTT TAGCGCTTTG CGAGACAGGC GCTTCAACGC TGTAACCTTG GATGAAATTC CGGACTTGTG CGTTTCTGTA TCGCTACTCG TTTGCTATGA AGAGTGCGAA ACGTGTCTCG ATTGGACGGT CGGGGTGCAT GGTATCATTA TTAGCTGGAC TGACGAGCTT CGAAACAGGG AATATTCTGC AACTTGTAAG TTACGGAGTG CAATACGACT GAATATATAA ATTGCTGTTC TATTGAACTG AACAAACCTT TGCCTTTCGT TGTAATTGTA CAGATCTACC TGACGTTGCC GAAGAGCAAG GCTGGGATCA AGCAACCAGC GTGACTTCAT TGATTCGAAA ATCCGGTTTT CGGGGGGAGG TAACGAAGGA TCTCCTTAGC CAAATCAAAT GCACGCGATA CCAGAGTTCC AAGCATAGCC TTTCGTTTGA CGAGTACCTG CACGAG
|
Protein sequence | MCLYCFDVLL QELKACKLRG WNSPPTSTPA FVGALSDDRV ECPIFVTWQK RRARRNRYAG GDETDTYELR GCIGSLTPKP LVQSVAEYAL FSALRDRRFN AVTLDEIPDL CVSVSLLVCY EECETCLDWT VGVHGIIISW TDELRNREYS ATYLPDVAEE QGWDQATSVT SLIRKSGFRG EVTKDLLSQI KCTRYQSSKH SLSFDEYLHE
|
| |