Gene PHATRDRAFT_12645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12645 
Symbol 
ID7201263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand- 
Start bp526993 
End bp527589 
Gene Length597 bp 
Protein Length199 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180661 
Protein GI219119818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTCCGGCTG GATGGGAAGA CATCTACGCG CTAGTGGTGG AATTGCGAAA AGATAGGACA 
GCGCCCTGCG ACGACTCGGG ATGTGAAGCC TTACCCGATC GTACGCAGAC TCCCAGAGAC 
TTCCGGTTTC AGGTCTTAAT TTCTCTCATG CTGAGTAGCC AGACAAAAGA TGCGACTGTA 
GGTGAAGCCA TTCGGAGCAT GCAGAAAGCT AATGTTTTGA ACGTAGAAAG TATTGTTGCA 
ATGGACGCAT CGGAGTTGAA TTCGTACATT AACAAAGTGG GTTTTCACAA CAACAAAACA 
AAATTCATCA AGCAAACCGT GGAAATACTT AAAGAAAAGT TCGACAACGA CATTCCGCCT 
ACAGCATCAA TCATGATGGA GCTTCCTGGA GTTGGCCCGA AAATGGCGTA CATTTGCGAG 
AACGTTGCAT GGAATCGGCA GACCGGAATA GGCGTCGACA CACACATGCA TCGTCTCTTT 
AACGCTTTAA ATTGGGTCAA GTCTAACACT CCTGAACAAA CGCGTGTCCA GCTCGAATCC 
TGGTTACCGC GAGATAAATG GGCTGAGGTC AATCTGCTGT GGGTGGGTTT CGGGCAA
 
Protein sequence
PPAGWEDIYA LVVELRKDRT APCDDSGCEA LPDRTQTPRD FRFQVLISLM LSSQTKDATV 
GEAIRSMQKA NVLNVESIVA MDASELNSYI NKVGFHNNKT KFIKQTVEIL KEKFDNDIPP 
TASIMMELPG VGPKMAYICE NVAWNRQTGI GVDTHMHRLF NALNWVKSNT PEQTRVQLES 
WLPRDKWAEV NLLWVGFGQ