Gene PHATRDRAFT_46007 details

Gene Information

• Locus tag: PHATRDRAFT_46007
• ID: 7201067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 940446
• End bp: 944426
• Gene Length: 3981 bp
• Protein Length: 773 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180148
• Protein GI: 219118763

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGCTA TTCGCAACCC ATACGCCAAG CCGAAAGCTT CCTTGAAACG GCCAAGGTCG 
AGTTGGGACC GCGAACGGAG TGACTGCAAG TGCCAGAACC CATCGGAAAA TCAAAACGAC 
AGCAATGGTG ATCGCTGCCG TGTTCCGCCA CAACCCACAA CGGCATCCGG CACATCACCA 
TTGAATCGAA GACTTACCAC AATTATGTCT GCGGAGAAGC CAAAGCAAAC GGCCCAATCG 
ACTATCAGTT CTTTTGATGA TGGGGGCATC GATTGGGAAG CTGCCGTTGC CATGATGGAA 
CAAGCGACGC CGGAATCGCA CATGAACACC AAATCTCATT CCACTCTGCA TTCCGGTCAC 
GAAAGCGCCG TTACAGAGAT TCCCATACCG GCAGCGTCTA TTCCTCGGCA CTCACCCAGC 
AAAAGTCTTA TGTCTACAAA ACGAGGTCCT CCGGATGCTG TCTACGAGCA TCCGTCCACT 
CGACTAACAT CTGATCCGAC TCGGCTCAAG CCCCCTCCGC GACCTACGAA TACAGCGTCG 
GTTCCTTCCC TTTCGTCTCG ATCCTCTGTC GCTCTCCCGA CATTAGCGTC CTTACGACCA 
GCTTCGTGGG CTGGCAACTG CAGCTCCGAT CCCTCTTTGT TTGCTGTTTC GGTTTCTTCT 
TCGCCTGCCA AGTCCAAATC AAATCTGACA ACGTCGTCGC CCTCAACCCA CCCTCGGTCT 
CGAACGGCGG TATCACCTTC CATGCGCCCT TCTTCTTGGC AACGCACAGC GCCTCCGGCA 
TCTCCAGACT CGGATGTTCC CAGTGATCCG CGACAGGTCA ATCTTCCCAA AAAGCTGCAG 
TTTGATGTCG CGACCGTCCA GCCTGTGCAA GACGAACACC GACAAACGCT AGTGCAAAAT 
GCTACCCTCT CCCAACCGCT ACTCAATGGG TGGACGCTTT TTTCGCACCA AAAAAAGGCT 
ATTCTCCAAG GATTGCTCAT GCGGCGCATG ATTCTCGCGC TCGACATGGG ACTAGGCAAA 
ACCCTCATTG GTTGTGTTTG GGCCAAGGCC TTTTCCAAGA CGCTACAAAC CAAAACAATC 
GTTATTTGTC CCGTCTCGCT TAGAGACGAA TGGAAACGGA CCGCAATCGA AGCCACAGGA 
TTGTCCGTAC AAGATGATAA GGACGTGCAG GACAACGTCA ATAACGCGAG TCTTTGCATT 
GCCTCGTGGG GGAAAATACC TCGCCTCGAC AAACACGACT TGGATCAGCG ACCCTTTGTC 
GTCGTCGCCG ACGAAGCGCA TAGCATGCAA AGTATGGCCG CCTCTCGAAC CAAGGATGTG 
CTTGTCTTGT GCGCACATCC CGCTTGCCGA GGCGTTCTCC TGTTAACGGG CACGCCCATG 
AAAAATGGCA AACCGTCCAA TCTTTTCCCT TTGTTACAGG CCGTGTCACA TCCGTTAGGG 
CGTCACCAAC TTTCGTACGA ACAGCATTTT TGCGCCGGCC ATTCGGAATC GTATGGACGG 
AGTCGTCCAG TCTGGAAGGC ATCTGGAGCT TCCAATCTAT CACAGCTGCG CACATTGGTC 
TCATCGCATC TGTTGCATTT AACCAAGCAG GATTGTCTAA AAGCGCTACC GCCGCAAACA 
CGTGAATTTC CGGTTGTTCC TATTAGCAGC CGTCAGCAGC TTGCGCACAC ACAGGCCTTG 
CACGATTTGG CCAAAATATA TCGAAAGACG GGAGAATCCA AAAGTAGCGA AGCTATTTTG 
GGCGCCGTAC AACGGGTACG TCTCGTTGCT TCCACAGCAA AGATTGACGC GACGGTCGAA 
TACGCCAAGC GCATACTAGA GGCAGAGCCT GCCATTGTGA TTTTTACAAG TTTTGTCAAG 
GTTGCACAAA ATGTACACCA GAAATTGACT GATGCGGGTT GGCAAGGGTC TTGCTTGACT 
GGGGAAACGG TCGCAAAATC ACGGCAAGCA CTCGTTGACA ACTTTCAAAA TGGATTGACT 
GCGTTTTTTG TGTGCACGTT CGGCGCGGGC GGTGTCGGGC TCACTTTGAC GGCAGCGTGT 
ACAGTGATTC TGTTGGACCG GCCATGGACA CCTGGCGACG CACATCAAGC TGAAGACCGC 
GTCCGACGTA TCGGACAAAC CAAACCAGTC AAAAGTTTAT GGATGACCGC CTTTGATTTA 
GACAAGCAAA TTGACTCCAT AATTGAGCAG AAGAGTAAAA CGGCGGCAAC GGTGCTCTCG 
ACAACAATGA CCGGGAGCTC CAGCGATGCT ACGAGTGAAG GCCCCAAATT GTCCATTTTT 
CAGCTTATCA AAGCTATTCT GCCGCCAAAC GAATCAAATT GATCGAAAGA ATAGACTGTC 
GATACCGGGA ACATAAGTCA AACGGAGAAA GCTCAAATCG ACTAATGTGA CCTACGTACT 
TTGATTGCCG CACGCGGCCA GACTTTCCGT TTCTATATCT GTTGAATTGC TTTCGGCGAG 
TGTCATGAGC AAATCCTCAA TGGAAATATT CTCATCACTA ACTTTAATTA TGGTCGACCT 
GATGGCATTT TTCATTTGGC TCGCTCCACA TGTTCCAAGA ATAAAGGGGG CCGTGCAAGA 
ATGTGTACCG AAAATCTGGG GACTGAGAAC TTGCATGAGC AGAATGATGG ATGTCATATC 
TGGCAGTGAA TAAAGCACCC TATGTGATAC GAGTAGCTCT TGTACGACAT TTGCATGACA 
CTCATCGGAA GAGGAATGGG GCTTGCCATC CGAGCTGTAC TTTTACCAGC GAACACAACC 
TGTCCCGTCT CTAAATCCGA CCCTATCTAA ATTTCCGATG CTATCCAAGG GAGAGGCCAG 
ATGTTGCTCT GGGGTCAAAA TCACTTCCGC AATTGCACAC GGTTCTTATT CCTCGATCGA 
TGTTGCTACA ATCCGATCGG TCCCCCACCG AATTGCGTAT TGGCTTTGAG AGAGCACACT 
TCACGAACAA CTTGCGATTA TCGAGATGCT ACGGATTTGA TTCGAGGAAA TCTGGTAAGG 
GGTTGGTTTT CTGCGATGAC TCCCTCTCTC GTGTCGCTGA AATCATGGCT GAAAGAAAGC 
GGATAGTCAA AGCACTACTA GCACTAGAGA AACTGTGGTG AACTCCTTGT TCGAAGTTGG 
CCTTTTGATT ATGACTTTGT TACTTGTTTC CCCAGATTGA TTTATCGTTT GTGATCTACG 
CCACACGCTC CATGTAAAAA TCGTCCATGA TTATATCGAG ATCATGGTTA GGGTCCTCAA 
CCTTGATGTG GAAGTTGCGA ATTTCAGGGT TCCATTTGGT TGAAGCGCCG GGGAATTCAA 
AGACGGAGCG AAACTCATTG AATACATTGG CGTTCCAAGC TGTCTGATAA TCTCCAAGAG 
TGAACGTTTC CAATCGCCAA TTTTTGTCAC GAAGGTAAAT CGATACGCGA GGACAAAAGT 
CGGAGCCCAT CTTGTCGGGT TTTCCATTTG GACTAACGCG ACAATTTACT CCTTTTTCCG 
TGGTTGGGTC CACAAGACGA AATCGGGCAC GTACTTCCCA CTTGGAACCC GGCGGAGTGC 
ATCCGTTATA GCTATTCCTG CTGACTCCTA TCCCCACTCC GTCCCACACG CGACTTCGCT 
TGGAATAGCG CAGCGCAGTT TTTGACTTGT AACCAGGAGA GACAAGCGAG ATGGATCCAG 
AGCCACGAGA GCGCCATTCC GTCAGCTTCG ACTCAAAATT GTTGTTTGTG ACCATGTTAT 
TGCACCTACT ATCCCAGGAC CCTGGCTTTT GATCTCCGGG CGTCGACACA GGACTATTCA 
CCTGCCCCCT TGTGGGAGCT ACGGGTACTT CTCTGGGAGC TTGGACAGGT GCTCTCGTAG 
GAGCCTTCAC CGGAGATCTT GTGGGCTGCT TACGCTCGAT GGCATCCCTG ATCCACGCTG 
TATCAGAGCA ACTGGCTTTG CCTAAGGAAT CGTTGGTATG CATACTACAA TCGTACGATA 
CCGTGTCGTC ACCGCACTTG C 

 

Protein sequence

MVAIRNPYAK PKASLKRPRS SWDRERSDCK CQNPSENQND SNGDRCRVPP QPTTASGTSP 
LNRRLTTIMS AEKPKQTAQS TISSFDDGGI DWEAAVAMME QATPESHMNT KSHSTLHSGH 
ESAVTEIPIP AASIPRHSPS KSLMSTKRGP PDAVYEHPST RLTSDPTRLK PPPRPTNTAS 
VPSLSSRSSV ALPTLASLRP ASWAGNCSSD PSLFAVSVSS SPAKSKSNLT TSSPSTHPRS 
RTAVSPSMRP SSWQRTAPPA SPDSDVPSDP RQVNLPKKLQ FDVATVQPVQ DEHRQTLVQN 
ATLSQPLLNG WTLFSHQKKA ILQGLLMRRM ILALDMGLGK TLIGCVWAKA FSKTLQTKTI 
VICPVSLRDE WKRTAIEATG LSVQDDKDVQ DNVNNASLCI ASWGKIPRLD KHDLDQRPFV 
VVADEAHSMQ SMAASRTKDV LVLCAHPACR GVLLLTGTPM KNGKPSNLFP LLQAVSHPLG 
RHQLSYEQHF CAGHSESYGR SRPVWKASGA SNLSQLRTLV SSHLLHLTKQ DCLKALPPQT 
REFPVVPISS RQQLAHTQAL HDLAKIYRKT GESKSSEAIL GAVQRVRLVA STAKIDATVE 
YAKRILEAEP AIVIFTSFVK VAQNVHQKLT DAGWQGSCLT GETVAKSRQA LVDNFQNGLT 
AFFVCTFGAG GVGLTLTAAC TVILLDRPWT PGDAHQAEDR VRRIGQTKPV KSLWMTAFDL 
DKQIDSIIEQ KSKTAATVLS TTMTGSSSDA TSEGPKLSIF QLIKAILPPN ESN