| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45989 |
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| Symbol | |
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| ID | 7201054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 878783 |
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| End bp | 881883 |
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| Gene Length | 3101 bp |
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| Protein Length | 1008 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180133 |
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| Protein GI | 219118732 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.400632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTATT TGAACAATCG TGTCGGCAAC GGCGGTCCCA GCGGCAGCAA AGCGGTTCGC
CCCCAGAACT ACGTACCCGG ACTCGGGCGC GGGGCTGCCG GATTTACAAC GCGCTCCGAT
GTCGGGCCCG CAGCGAACGT TGCCCTTACG GCCGAATCCA CGGGAGGCAG TCGGGCAGCG
GATGCACGCG CTGCCAAACT GCAAGCCCAA AAGCAGAAGG GTCTCTTTGG AGATGCGCCT
CAGAATTACG TACCGGGAGC GGGACGGGGT GCGGGCAGCA TGGGTGCAGC GGGGACCGGG
GGGCCTGCCA CGGCGACAGT GGGTTCCTAC GACGCCTTTG GCGGCTATCA GGAACGCCCA
GTGAACGAAG TTCCGGGACA GTACGACGAA GATGATGACG AAGCGGATCG TATTTGGGCT
GCCATTGACG AACGTGTGCA GAGCAGGAAA CGAAAGTCCC AACAGCGAAA AGAGGAAACC
GTAGCAACGT CCGCCGAGAC GGACAATGCT CGTGTACGGA TAGGATCGCA ATTCAGAGAG
CTCAAAGAGA AACTGAAAGA TGTTTCGGAA GACCAGTGGG CAGCTATTCC CGACGTGGGG
GATCACAGCA TCAAGTACAA GAGACAAAGG CAGCAACAAA ACGAAATGTT TACTCCGCTC
TCCGATACCC TACTAGAGCA GAGGAATCAA GCCAATCTTG ACGCAACTGC GGGCAACACA
GCCTTGGCCG GGACTACTAC AGCCGCTGAT GGCATCCACA CCACGGGAGT AACTACGACC
ATGGCCAACA TGTCGGGATT GAGTGCCGCG CGGGGTACCG TCTTGGGCAT GAGTCTCGAT
AAAATGTCTG ACTCCGTATC CGGTCAAACC AACGTGGATC CTCAAGGCTA CCTGACGTCG
CTCGGCAGTA GCACTACAGC CCTCAACAAC GCTTCACAAG TGGCTGATAT TCATAAAGCT
CGACTGCTGC TGAAATCGGT TCGTGATACC AATCCACAGC ATGGACCTGG CTGGATTGCC
TCTGCCCGCG TAGAAGAAAC GGCAGGAAAG CTTCTGCAAG CCCGTAAGAT TATTCAGGAA
GGAACCCGTG TTTGCCCCGA CAATGAGGAC GTTTGGCTTG AAGCCGCCCG TCTGCATCCA
ATTCCCGTAG CCAAATCCAT TTTGGCGACA GCCGTCCGGA GAATACCTAC ATCGATACAA
ATCTTTTTGA AAGCTGCTTC CTTGGAAACG GCCGACTCCG CCAAGAAAGC TGTCCTGCGC
AAGGCTCTCG AAGCCAACCC AACCTCCACA CTGCTCTGGA AGGCTGCGAT TGACTTGGAG
GAGGCCGACG ATGCCCGAGT ACTATTAGCG GTCGCTGTCG AAAAGGTTCC GCAAGACGTC
GATTTATGGC TTGCCTTGGC ACGCCTCGAA ACATATCAGA GCGCTCAAAA GGTGCTGAAC
AAAGCCCGCA AAGCCTTACC ATCCGATCGC TCGGTCTGGC TGGCAGCGGC CAAGCTGGAA
GAATCGCAAG ATCACGTTGA TACGGTATCC AAGATTGTCG ATCGAGCCGT ACGGTCGCTT
CGGAAACAAG ACGCCGTTAT ATCGCGAGAA CAATGGTTAG AGGAAGCCGA GAAGGCGGAA
TCGGCCGACG CACCGATCAC AAGTGCGGCA ATCATACACC ATACGATTGG TCAAGACGTG
GAAGAAGAGG ATTGTCTGCG TACCTGGTCG GAAGACGCCA AAGCTTGTGT TGCCCGGGGT
TCCGTCGTGA CGGCACGGTC TATTCTCGCG CACGCGTTGC GAGTGTTTCC GAGCAAGCGT
GTTTTGTGGA TGCAAGCGGT AGAATTGGAA CGCCAGCATG GGACAGCGGT AACACTAGAA
GAGCGTTTAC GGGATGCCAC ACATGCTTTA CCGCGGGTGG AGATTTTCTG GTTATTGCGC
GCGAAGGAGC AATGGATGGC GGGCAAGGTC GACGAGGCAC GTCAGATCCT GACGGACGCC
TTTGCGGCCA ACCCGGATTC TGAGTCGGTC TGGTTGGCGG CGGCCAAGCT GGAGTGGGAA
AACGACGAAC TGGAGCGAGC GCGAGTCCTG TTCGCTCGGG CGCGTGAACG AGCACCGACG
GCCCGCGTAT ACATGAAATC GGCGATTCTG GAACGGGAGC AAAAGTGTTT CGGGGATGCG
CTGAAGCTGG TAGAAGAAGG AATCGAAAAG TATCCCAAAT TTGCCAAGCT GTACATGATC
GGGGGACAGA TTTACGCGGA CGACATGCCG AAGCACAAGG GAAGCTTGGA TCGAGCGCGC
AAGTTTTATC AGCGAGGACT GGAAGCTTGT TTGGAGAACG TGACGCTCTG GAAGTTGGCG
AGTCGGTTAG AAGAATCGGC GTGGCGGTTC GACGCAAAGG ATGCGGCTGG GGAATCCGAC
AAGGCTGTGA GCAACGGGAA CGTTGTAGCC AAACCTGGAG CTGCGGGTGC TACCAAAGCG
CGCAGTCTTT TGGAATTGGC CCGTCTGAAG AATCCCAAAA ACGCGGAATT GTGGTTAGAA
GCCGTCCGGT TAGAGCGTCG GAACGGGAGT CTCCGCATTT CCGAAAGTTT GCTGGCGAAA
GCGTTGCAGG AATGTCCGAC TTCGGGAATG CTGTTGGCCG AAACGATTTG GACAGCGCCG
CGCGCGACTC AAAAGTCGAA ATCGGCAGAC GCCATTCAAC TGTGTCCGGA CGACCCGCAG
GTAATTGTGG CCGTGGCGAG CCTATTTGCG TCGGAACGCA AGCACGAAAA GGCGCGGAAG
TGGTTCGATC GCGCTGTAAC ACTGAATCCG GATCTCGGTG ACTCGTGGGT CCGTTACTAC
GTGTTTGAAC TGCAATGGGG GACTGTGGAG CAGCAAGGGG CCGTGAAAGA ACGATGTATT
GCGGCGGAAC CCAAACACGG CGAGTTGTGG GCATCTACGA GAAAGGAGGT AACCCGACGA
CACGAGTCGA TCGGAGAAGG TCTCGAGGTG GCCGCCCAGA AGCTTCGCAA CGCGCAGGAA
AGCGAGAATC CCTCCGTTAT GCTCTAATGG AGTAGCAAAG CGTTTCCCTT AGTGTATGTC
CCTGTGGCTA TTTTCCAGTT ACTAGTGTAT GAGGTACAGT T
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| Protein sequence | MSYLNNRVGN GGPSGSKAVR PQNYVPGLGR GAAGFTTRSD VGPAANVALT AESTGGSRAA
DARAAKLQAQ KQKGLFGDAP QNYVPGAGRG AGSMGAAGTG GPATATVGSY DAFGGYQERP
VNEVPGQYDE DDDEADRIWA AIDERVQSRK RKSQQRKEET VATSAETDNA RVRIGSQFRE
LKEKLKDVSE DQWAAIPDVG DHSIKYKRQR QQQNEMFTPL SDTLLEQRNQ ANLDATAGNT
ALAGTTTAAD GIHTTGVTTT MANMSGLSAA RGTVLGMSLD KMSDSVSGQT NVDPQGYLTS
LGSSTTALNN ASQVADIHKA RLLLKSVRDT NPQHGPGWIA SARVEETAGK LLQARKIIQE
GTRVCPDNED VWLEAARLHP IPVAKSILAT AVRRIPTSIQ IFLKAASLET ADSAKKAVLR
KALEANPTST LLWKAAIDLE EADDARVLLA VAVEKVPQDV DLWLALARLE TYQSAQKVLN
KARKALPSDR SVWLAAAKLE ESQDHVDTVS KIVDRAVRSL RKQDAVISRE QWLEEAEKAE
SADAPITSAA IIHHTIGQDV EEEDCLRTWS EDAKACVARG SVVTARSILA HALRVFPSKR
VLWMQAVELE RQHGTAVTLE ERLRDATHAL PRVEIFWLLR AKEQWMAGKV DEARQILTDA
FAANPDSESV WLAAAKLEWE NDELERARVL FARARERAPT ARVYMKSAIL EREQKCFGDA
LKLVEEGIEK YPKFAKLYMI GGQIYADDMP KHKGSLDRAR KFYQRGLEAC LENVTLWKLA
SRLEESAWRF DAKDAAGESD KAVSNGNVVA KPGAAGATKA RSLLELARLK NPKNAELWLE
AVRLERRNGS LRISESLLAK ALQECPTSGM LLAETIWTAP RATQKSKSAD AIQLCPDDPQ
VIVAVASLFA SERKHEKARK WFDRAVTLNP DLGDSWVRYY VFELQWGTVE QQGAVKERCI
AAEPKHGELW ASTRKEVTRR HESIGEGLEV AAQKLRNAQE SENPSVML
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