Gene PHATRDRAFT_45921 details

Gene Information

• Locus tag: PHATRDRAFT_45921
• ID: 7201135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 676486
• End bp: 677228
• Gene Length: 743 bp
• Protein Length: 228 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002180293
• Protein GI: 219119053

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGCTG CTGCCGCCGC CGTTAAAAAG CCTTTGTTGA CTCCGATGGA GGAGCTCTTG 
GGGACCAAGC TTTTGGAGAA AGCGAAGGGA CCCAAGAAGG ATACCAAGAC GTTGCTCAAA 
GACAAAGACT TGGTGGCTCT GTATTTCAGT GCGTCTTGGT GCAAGCCGTG TCAAACATTC 
TCTCCTCTTC TCATGGAATT CTACGATCAC ATCGAAGGCA TGAATGTTGA CGTCGTCTTT 
GTTTCCAGCG ATCGCACTAC TCCGGAATTT GACGAATACT ACGGACACAT GCCGTGGTTG 
GCCATTCCGT CGGATGCCGG GGCGGCAAAA ATCAAAAACA ATCTCTCGCA GCGACTCAAA 
ATTCAAGGCA TTCCTTCTTT GATTGTAGTG GATGCCAAAA CTGGAGAATT CGTTTCCGAT 
AAAGCACGGT ACGAAGTCAC CGGAACCTTT ATTGACGAAA AGCAGGCGCA AGGCATCGTC 
ACCAAATGGA AAGGATTGGA ACGAAAGCCC CTAGATCAAG GCATTTTGGA CGGCCAGGAA 
CCGGGGGGTA TCAAAGGCTT GATAATGATG TTGCTCAAAA GTCCGGCCAG CATTTTTGCA 
ATCTTGTACA TTTATCGCAA CGCTGGGGGA TGGTTCAAGG AAATTATGGA TAGGTTCAAG 
CAACCGGGCA CAGATAACGA GTTGTAAACT AACTGTAAGC AAGTAAGACT ATTCTCGTCA 
CCATAATGAT AATTTGTATA TCC 

 

Protein sequence

MPAAAAAVKK PLLTPMEELL GTKLLEKAKG PKKDTKTLLK DKDLVALYFS ASWCKPCQTF 
SPLLMEFYDH IEGMNVDVVF VSSDRTTPEF DEYYGHMPWL AIPSDAGAAK IKNNLSQRLK 
IQGIPSLIVV DAKTGEFVSD KARYEVTGTF IDEKQAQGIV TKWKGLERKP LDQGILDGQE 
PGGIKGLIMM LLKSPASIFA ILYIYRNAGG WFKEIMDRFK QPGTDNEL