| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45824 |
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| Symbol | |
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| ID | 7201077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | - |
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| Start bp | 389244 |
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| End bp | 391025 |
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| Gene Length | 1782 bp |
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| Protein Length | 580 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180224 |
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| Protein GI | 219118915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.122291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACGA CTCCTCCGGA GATGATCCCG CTGGTAGCGT CTCAACTCGC TCCGGCTTCG
TACCAGACCA CTGGTAAGCC GGTAACGGAG CTCCCCCGCA CACCCGATAT GCGTCGTAAG
CTGTCGCAAC TTAAGGACGA CGATGATGAC GACGATTCCC AAGAACATAA AACGACCGTC
TGGCAAACCT TCATTCACTT GACTAAGGGT TACATAGGCT GTGGCGTCCT CAGTTTGCCT
TGGGCCGTGA GTCAGTTGGG CGTACCGCTG GGATGCACCA TGATTGTCCT CATGAGCTGC
TGGAGTTCGT ACAATTGCTG GACGGTAGTC AAACTCAAAC GATTCATTGA GCGGAAAAAC
GTCAGCGTTG GCAACTACGT GCCCCAGACT AGTGCGATTG ATGACGCCGC CAGTGACACC
CCGAGTAACG TCTCAAACAA TACCAACATT ACCTACCCCG ACGTTGGCGA ATGGGCTTAC
GGAAAACAGT TCAACAGCTA CGTCACGGCC TGTGTCTGTA TTCAACAACT CGCCATCTGC
ACCGTCTTTT TAAGTTTCAT TGGTGAAAAT ATCCTGGCCG TGCTCGAGCG TATGGAGGTC
CACATGCTTT CCACCCACGC CGGTGTCCTC ACTTTGGCCC TGCCGGTGGT TCTCTCGCTC
TCCTATCTGC CCAATCTCAA GTCACTATCT CCCGTTATGG CTGCGGGGAG CATTACACTT
ATGGTTGGCT TTGGTGTGCT GGGCTACGTC ATTGTCAAGT TTTGGGACGA GCGACCCGAA
ACTACCCCTA CAATTAACGT GTCCCAAGCG CCCCTGGCGG TTTGTGCCAT TCTCTACTCT
TACGAAGGCA TTTGCCTCAT TCTACCCGTC GAGTCGGCCA TGAAGGATCC TCAACATTTC
AAACCCGTCT TTGTGGCTTC CATGGCAACT GTGGCACTCA TTCTTGCCCT TGTTTCGTCG
CTCTCCGTCA TGGCCTTTGG CGAAGTCACC AACGGAAGTA TTACGGCTTT TCTAGTCAAG
GAGTTTTCCG ACAATGAGAA TATCTCGTTA TGGCTTATGA TTTCCAATAC GGCCGTGAGT
TTGTCCGTGC TGCTAACGTA TCCGTTGCAG CTCTTTCCCG CGCTGGAACT GATTTCACCC
TGGGTGCAAA GCAAGTTTCC ACCCAAGACG GACGCGGCTG ATGAGGACGA CCTCGACGCC
TTTGAGCCCC TACCGCCGCT TCCGGAACAC GAAGTAGCCT CGATTGGGTC ACACGAATAC
GACAACTTTG AATTTGATGT CGACGAGGCA GAACCGGCCA AGAATGGTGA CAACAAGGAC
GAAGACGATA CGAGTCGAGC CGGTATGAGT TCCGTCACGA GTATGTTTCC CGAAATGACA
ATGCCCGGGG ATTCACCAAT GCTGCGTACA GCTCTGGTGA TATCCACCTA CCTAGTCGCC
GTTGTCGTTC CCAACGTACA AGCCCTTATT TCTTTAGCTG GAGCTTTGGC GGGATCGTCC
ACGGCATTAT TAATACCGCC AATTTTGGAA CTGGCCTTTA TCAAACATCT CGAAACGGAC
GCTTCACAAG AGGAAGTGGC CAGGGTAGAC GAAAGACGAT GGCGGTTACT GACGTCAATG
CGGGACAAAT GGCTTTTTGA AAAGGTCAAG AGCTATATCT TGTTGGCGCT TGGGTTCGTC
TTTTGTGTGT TTGGAACGTA CGCGTCCCTG GCCGATATTG TACGCATCTA TTTGGGCAAA
TAAAATCAAC TTTAAAGCAA CAAAGAAACT GTTTACATTG CG
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| Protein sequence | MATTPPEMIP LVASQLAPAS YQTTGKPVTE LPRTPDMRRK LSQLKDDDDD DDSQEHKTTV
WQTFIHLTKG YIGCGVLSLP WAVSQLGVPL GCTMIVLMSC WSSYNCWTVV KLKRFIERKN
VSVGNYVPQT SAIDDAASDT PSNVSNNTNI TYPDVGEWAY GKQFNSYVTA CVCIQQLAIC
TVFLSFIGEN ILAVLERMEV HMLSTHAGVL TLALPVVLSL SYLPNLKSLS PVMAAGSITL
MVGFGVLGYV IVKFWDERPE TTPTINVSQA PLAVCAILYS YEGICLILPV ESAMKDPQHF
KPVFVASMAT VALILALVSS LSVMAFGEVT NGSITAFLVK EFSDNENISL WLMISNTAVS
LSVLLTYPLQ LFPALELISP WVQSKFPPKT DAADEDDLDA FEPLPPLPEH EVASIGSHEY
DNFEFDVDEA EPAKNGDNKD EDDTSRAGMS SVTSMFPEMT MPGDSPMLRT ALVISTYLVA
VVVPNVQALI SLAGALAGSS TALLIPPILE LAFIKHLETD ASQEEVARVD ERRWRLLTSM
RDKWLFEKVK SYILLALGFV FCVFGTYASL ADIVRIYLGK
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