Gene PHATRDRAFT_45778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45778 
Symbol 
ID7200796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp248963 
End bp250042 
Gene Length1080 bp 
Protein Length359 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180201 
Protein GI219118869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATC GACGCGCCTC TTTTCAGCCA CCCTGCTACA TTTTCGTCTT TTGTTTCAAC 
CTTTACACCT CAGTATCAGT TTCAATCTGT TGTATATCTG CGATGTCGGC CCTCGCGTCG
ACAGCCGTGG CCCTCAGCAG TCGTGCGTTC GCGCCAACGG CCATCGAAAT CACACTTGCC
TGCGCTGATG GGATGACACT GGCTGCGCAA TCGTGGAAGC CATCAAGTGA GCACACCACA
AAGCGCCGCA TTTTATGTCT ACATGGCTGG ATGGACAACT CGGCAAGCTT TCATTACTTG
GCCCCACGGA TAATGGAACA CTTTCCCATG GACACGGAAT TGGTGGCGTT GGATTTTCCG
GGCCATGGAC TGTCCTCCCA TAAATCTATC GATGGTCCCC CTTTGATGCT TTCAGAGTCC
GCGTTTTATG TTGCTGAAGC CGTCCGGCGG CTCAAATGGG ATAGTGAGTC AACCCCGTTT
ACATTGATTG GACACAGCAT GGGAGCAGCC GTCGGCTGTT TGTATTCGGC GGTGTATCCT
GAACAAGTCA AAAACCTCGT TCTTTTGGAA GGGGCAGGCC CTTTGGCTCG AAAGACCGAA
GACATTGCCA AACATATACG AATGCATGTA CAGCGCCGGC AAACTGCTCT GATACAAAAC
AAGTCTCCTC GTATATATCC CTCGTTAGAG CTGGCAGTGG CTACTAGGCG CCAGACAGCC
AAAAATTTTC CTGGCGATCA GTCGCTGAGC AAAGAGGCTG CGACCTTGAT GGTAAAACGC
GGATCTGTGT CGGTTGGAGA AGGGGTTCGG TTTTGTCATG ACGCCCGTTT ACAATGGCCT
TCTCTTCAGT ATTTCACCAC TGAGCAAACA GAAGCTCTGT ACAAAGATAT TCAGTGCCCG
ACCGCGTTAA TACTCGCAAA ATCCGGCTGG CCATTTGACG AAGATCGACA AAATCGAACA
TTGGAACTGT TACGCCCAGT GCACTACACC ACACTGGCAG GAAGCCACCA CTTTCACGCG
GATCCAGATA CCGCAGAGAG CGTAGCTCAG GAAGTCCTGC GCTTTTTAGA GCAAGAGTAG
 
Protein sequence
MRNRRASFQP PCYIFVFCFN LYTSVSVSIC CISAMSALAS TAVALSSRAF APTAIEITLA 
CADGMTLAAQ SWKPSSEHTT KRRILCLHGW MDNSASFHYL APRIMEHFPM DTELVALDFP
GHGLSSHKSI DGPPLMLSES AFYVAEAVRR LKWDSESTPF TLIGHSMGAA VGCLYSAVYP
EQVKNLVLLE GAGPLARKTE DIAKHIRMHV QRRQTALIQN KSPRIYPSLE LAVATRRQTA
KNFPGDQSLS KEAATLMVKR GSVSVGEGVR FCHDARLQWP SLQYFTTEQT EALYKDIQCP
TALILAKSGW PFDEDRQNRT LELLRPVHYT TLAGSHHFHA DPDTAESVAQ EVLRFLEQE