Gene PHATRDRAFT_45735 details

Gene Information

• Locus tag: PHATRDRAFT_45735
• Symbol: PDS1
• ID: 7200765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 74861
• End bp: 77104
• Gene Length: 2244 bp
• Protein Length: 624 aa
• GC content: 54%
• Product: phytoene dehydrogenase
• Protein accession: XP_002180171
• Protein GI: 219118809

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGGCACGT TGACTGGTCA GTATACCTAC ATACGTATAC TAGATATTCA CTCCCACACG 
TATACACAAA TAGTCATTGT TGTCGCTACC GTTTGGTGTT TGTTGTCCTC CTCTTTCGCA 
ACTATCCAAA AGTCGAAATC GCCAACGCCA GTTCTTCTGA TTCCATTTGG TATCGTTCGT 
GTCGTTGCCC GTGTTTGTGT TGTTGTTGTG TTGGTCTTTC TTTGTCCAAC CAGCCAACAA 
ACCTTGCAGT TCATCTATAA TCTAAACTCC GGAGTCACGA TCAAGGGATG ATGTTTCACT 
ATAAGACAGG GTCGTCATGG TTCCTGCTGC TGTCCGCATC CATTACCACA ACCCTCACGA 
CGACAACGAT GACAACAACC CACGCCTTTG CCCCGCACAC GCGCTTATCC GTGCCCCACG 
GTGCTTCCCG ACTCGTCATG AAGGATTTCC CCAAACCCAA TTTGGAAGAT ACGGACAATT 
ACCGTTTTTA TCGTGATTTG TCGCACTCCT TCTCCACGAC ACTCAAGGCA CCGTCGCCAG 
AATCACGCAA GAAGGTAGCC ATCATTGGCG GTGGCTTGTC CGGTCTCGCC TGTGCCAAGT 
ACCTCGCCGA CGCCGGACAC CAACCCGTCG TCTACGAAGC ACGGGACGTC CTCGGCGGCA 
AGGTCTCCGC TTGGCAAGAT GCCGACGGAG ACTGGATCGA AACCGGACTA CACATTTTCT 
TTGGTGCCTA CCCGAATATG ATGAATCTCT TTGCCGAACT TGATATTCAC GATCGTCTCC 
AGTGGAAGGT GCACAAAATG ATCTTTGCCA TGCAGGAACT ACCCGGAGAA TTCACAACCT 
TTGATTTCAT TCCCGGCATA CCCGCACCCT TCAATTTCGG ACTCGCTATT CTCATGAACC 
AGAAAATGCT CACTTTGCCG GAGAAAATAC AGACGGCTCC CCCGCTACTG CCCATGCTCG 
TACGCGGACA AGACTTTATC GACGAACAGG ACGAACTCTC CGTCCTCGAC TTTATGCGCA 
AGTACGGGAT GCCCGAACGC ATCAACGAAG AAGTCTTTAT CAGCATGGCC AAGGCACTCG 
ATTTCATTGA TCCCGACAAA TTGAGTATGA CGGTCGTTTT GACCGCCATG AATCGCTTTT 
TGAACGAAGA CAACGGCCTC CAAATGGCCT TTCTCGACGG CAATCAGCCC GACCGGCTCT 
GTGCACCCAT GGTCGAACAC ATTCAAGCCC GTGGCGGTCA AGTCAACCTC AATTCCCCCG 
TGCAAGAAAT CGTCACCCGC GAAGACGGTA GTGTCGATTA CCTCCTGATG CGGTCCGGAG 
AAAAGGTCGT TGCCGACGAA TACGTGTCCG CCATGCCCGT GGATATTGTC AAACGCATGT 
TGCCCGAAAA GTGGCAAACA ATGCCCTACT TTCGTCAATT CGACGAACTC GAAGGCATTC 
CCGTCATTAA CCTCCACATG TGGTTCGATC GCAAACTCAA AGCCGTCGAT CACTTGTGCT 
TTTCCCGCTC GCCGCTGCTG TCCGTTTACG CCGACATGAG CGTCACCTGC AAGGAATACT 
ACGACGAATC CGCTTCCATG CTCGAGCTCG TCTTTGCCCC GTGCAGTCCT CTCGCCGGTG 
GTAACGTGAA TTGGATTGCC AAGACGGACG AAGAAATCAT CGACGCGACC ATGGGCGAAC 
TGGCCCGACT CTTCCCCACC GAAATCGCCG CTGATCCCAC CTGGCCGGCC ACCAAGAACC 
AGGGCCCCAA CGGTGAGGCC AAACTTCGCA AATACGCCGT GGTCAAGGTG CCCCGCTCGG 
TCTACGCCGC CATTCCCGGC CGCAACAAGT ACCGCCCGAG TCAAACCACT CCAATTGACA 
ATTTCACGCT GGCCGGGGAC TGGACGTCAC AAAAGTTTCT GGGATCCATG GAAGGCGCCG 
TCCTCGGGGG CAAGCTCGCC GCCGAAGTAT TGGCCCGCAA GGCGGCCAAC CTACCCGCAC 
CCGAACTCGC CAACAAACCC GTGCGGGATG AAATTGTGCA AAAGGCGCAA ACGCACGTGG 
CGCGTCCACC GGCCGGAGTC AAGGGACAAG GTGCGATTGC CTTTGGCGGT GGCGCCGTGC 
TCGGGACGGA AAACAAAGCC TTGCTTCGGG ACGTTGATCC TAGTCAATTC GTGGAAGCCT 
AGTACACACA CACACACACA ACCGACTCTA GTGAAGGAAA GTGTAAATCT GTTGCCGGTA 
ACAACTAACG CATTTTGATG ATTG 

 

Protein sequence

MMFHYKTGSS WFLLLSASIT TTLTTTTMTT THAFAPHTRL SVPHGASRLV MKDFPKPNLE 
DTDNYRFYRD LSHSFSTTLK APSPESRKKV AIIGGGLSGL ACAKYLADAG HQPVVYEARD 
VLGGKVSAWQ DADGDWIETG LHIFFGAYPN MMNLFAELDI HDRLQWKVHK MIFAMQELPG 
EFTTFDFIPG IPAPFNFGLA ILMNQKMLTL PEKIQTAPPL LPMLVRGQDF IDEQDELSVL 
DFMRKYGMPE RINEEVFISM AKALDFIDPD KLSMTVVLTA MNRFLNEDNG LQMAFLDGNQ 
PDRLCAPMVE HIQARGGQVN LNSPVQEIVT REDGSVDYLL MRSGEKVVAD EYVSAMPVDI 
VKRMLPEKWQ TMPYFRQFDE LEGIPVINLH MWFDRKLKAV DHLCFSRSPL LSVYADMSVT 
CKEYYDESAS MLELVFAPCS PLAGGNVNWI AKTDEEIIDA TMGELARLFP TEIAADPTWP 
ATKNQGPNGE AKLRKYAVVK VPRSVYAAIP GRNKYRPSQT TPIDNFTLAG DWTSQKFLGS 
MEGAVLGGKL AAEVLARKAA NLPAPELANK PVRDEIVQKA QTHVARPPAG VKGQGAIAFG 
GGAVLGTENK ALLRDVDPSQ FVEA