Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_4016 |
Symbol | |
ID | 7200970 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 528123 |
End bp | 528935 |
Gene Length | 813 bp |
Protein Length | 248 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180255 |
Protein GI | 219118977 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0489312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCCGGAAAT ACCAGCAAGT TGGGCTCAAT TGGTTAGTGT CCTTGCAGAC TAGACGGCTG AACGGAATTT TGGCAGATGG TAAGAATTTG AAAGAGATTG TTGCTTGAGC TGGGCGCGCT TTTCCTCATC GGTAACTTTG CGTTGTAGAG ATGGGCTTGG GAAAGACACT CCAGACAATA TCGCTGTTTT CGTATCTGGC TTCATACAAA GGTATATGGG GACCCCACCT CGTGGTTGTT CCGACTTCTG TCATCGTGAA TTGGGAGACT GAGCTCAAAC GATTTTGCCC GGCGTTGAAA GTTCTTTGCT ACTACGGTCC AGCAAAGCGG CGTAAGGAGC TACGAACAGG CTGGACAAAG TCAAATTGGT ATCATGTTGT AATCACATCA TATCAGCTGG CCGTCCAGGA TGCCTTTGCC TTCAAGCGCA AACGTTGGTA CTATATGGTT CTTGACGAAG CGCAAAATAT CAAAAATTTC CAGAGTCAAC GCTGGCAAAC ACTAATAAAT TTCAACACCC AGCGTCGTCT CCTGCTGACA GGTACACCTC TTCAAAACAA CCTGATGGAG CTTTGGTCCC TGCTACATTT TCTCATGCCG TATATCTTCC GTTCCCGCAA GGAGTTTTCT TACTGGTTCG CCAACCCGAT GAATGATATG ATTGAAGGAA GTGGAGCCAA AAATAACGAT GTTGTTAGTC GTCTGCATGG GATCATTCGC CCTTTTGTCC TTCGGCGACT GAAGAAAGAC GTAGAAAAGC AGATGCCTGG AAAGTTCGAA CATATCGTTA AATGTCAGCT ATCGCGACGA CAG
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Protein sequence | LRKYQQVGLN WLVSLQTRRL NGILADEMGL GKTLQTISLF SYLASYKGIW GPHLVVVPTS VIVNWETELK RFCPALKVLC YYGPAKRRKE LRTGWTKSNW YHVVITSYQL AVQDAFAFKR KRWYYMVLDE AQNIKNFQSQ RWQTLINFNT QRRLLLTGTP LQNNLMELWS LLHFLMPYIF RSRKEFSYWF ANPMNDMIEG SGAKNNDVVS RLHGIIRPFV LRRLKKDVEK QMPGKFEHIV KCQLSRRQ
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