Gene PHATRDRAFT_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_4016 
Symbol 
ID7200970 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp528123 
End bp528935 
Gene Length813 bp 
Protein Length248 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180255 
Protein GI219118977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0489312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCCGGAAAT ACCAGCAAGT TGGGCTCAAT TGGTTAGTGT CCTTGCAGAC TAGACGGCTG 
AACGGAATTT TGGCAGATGG TAAGAATTTG AAAGAGATTG TTGCTTGAGC TGGGCGCGCT
TTTCCTCATC GGTAACTTTG CGTTGTAGAG ATGGGCTTGG GAAAGACACT CCAGACAATA
TCGCTGTTTT CGTATCTGGC TTCATACAAA GGTATATGGG GACCCCACCT CGTGGTTGTT
CCGACTTCTG TCATCGTGAA TTGGGAGACT GAGCTCAAAC GATTTTGCCC GGCGTTGAAA
GTTCTTTGCT ACTACGGTCC AGCAAAGCGG CGTAAGGAGC TACGAACAGG CTGGACAAAG
TCAAATTGGT ATCATGTTGT AATCACATCA TATCAGCTGG CCGTCCAGGA TGCCTTTGCC
TTCAAGCGCA AACGTTGGTA CTATATGGTT CTTGACGAAG CGCAAAATAT CAAAAATTTC
CAGAGTCAAC GCTGGCAAAC ACTAATAAAT TTCAACACCC AGCGTCGTCT CCTGCTGACA
GGTACACCTC TTCAAAACAA CCTGATGGAG CTTTGGTCCC TGCTACATTT TCTCATGCCG
TATATCTTCC GTTCCCGCAA GGAGTTTTCT TACTGGTTCG CCAACCCGAT GAATGATATG
ATTGAAGGAA GTGGAGCCAA AAATAACGAT GTTGTTAGTC GTCTGCATGG GATCATTCGC
CCTTTTGTCC TTCGGCGACT GAAGAAAGAC GTAGAAAAGC AGATGCCTGG AAAGTTCGAA
CATATCGTTA AATGTCAGCT ATCGCGACGA CAG
 
Protein sequence
LRKYQQVGLN WLVSLQTRRL NGILADEMGL GKTLQTISLF SYLASYKGIW GPHLVVVPTS 
VIVNWETELK RFCPALKVLC YYGPAKRRKE LRTGWTKSNW YHVVITSYQL AVQDAFAFKR
KRWYYMVLDE AQNIKNFQSQ RWQTLINFNT QRRLLLTGTP LQNNLMELWS LLHFLMPYIF
RSRKEFSYWF ANPMNDMIEG SGAKNNDVVS RLHGIIRPFV LRRLKKDVEK QMPGKFEHIV
KCQLSRRQ