Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35781 |
Symbol | |
ID | 7201019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 736233 |
End bp | 737390 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180108 |
Protein GI | 219118680 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAA ATGAGATTGG GCTCATTGCG CCAACACCGG CGCTAGACAG TTTGTCCGAA GATGTTACCT TTCTTTGGCT CTCGGGCCAA GCGTCCATTC CCGTATACGA CGAAGTGCCA TCGTCACTCG TATTTCTACG TGATCATGTT GCTTTGAGCC GTCCGTGTAT CATTCGCAAT GCCGTTTTGG ATAAAAGTGA AAACAAATGT CCTCTGCACC TAACATTGGA CGACTTGGTT GACTCGGATC CGACACTCTC CTTAGTGGTA GACGTGACTC CAGACGGACA AGGCGATTGT TTGAGGCTTG CCCAACATCA AACCCTGGGC TGCAAACATA AAGAAAACAG TCAACGAACG TTTGTCAAAC CATTTGAACA CCGCATGTCC ATATCGGAGT TTCGTTCTTG TTTGCGAGCA ACTCGATCTG GGACGACACC ATCGCTAGAG CAAATCAAAA ATCGTATATT TCAGTCCACG GCCGACGTAT CATGCACTGT TTCTGAGGAA GCATTCAATC ACGGTCTTCC GACGGAAGCC GTTTACTACT ATTCTCGTCA AAACGATTGC TTGCGGAGCG AGCTGTACTC GTTGTGGCAA AAAAAGCTCT TTCCGGAGAA TTTTGTATGG GCATCCGAGG CCTTTGGTGT GCCCGAACCG GAGGCTGTCA ACCTTTGGTT GGGCAACGAG CAAGCAGTTT CTTCGATGCA CAAGGATCAC TACGAAAATT TATTCTACGT CCTATCGGGC GAGAAAGTTT TCACTCTTTG TCCTCCAGCT GATGCACCAT TCTTATACGA ACAGAATTGT TCGAGTGGAT GCTTTCAGTA CAGCGCGACC GAAGGCTGGA CGATAAGCTC CGATGTTCAT CAAGACGGAA CAACATTGAA GATCCCTTGG ATTTCTGCCG ACGTGGTCGA GAAAGAGAAA TCGGAGGTTC TTGATGAGTT TCCACTTTTG ACTTATACGC ACCCTTTGGA AGTGCACATT CGAGCTGGCG ATCTCTTGTA TTTACCGGCT TTGTGGTTTC ACAGAGTTAC GCAATCCTGC GAGACCGTTG GCATAAACTA CTGGTACGAT ATGAAATTTG ATTCACCTTC TTGGTGTTAT TTTCATTTTT TGCAATCCCT CATACCCAAC GAGGCCATCC AAGGCTGA
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Protein sequence | MQKNEIGLIA PTPALDSLSE DVTFLWLSGQ ASIPVYDEVP SSLVFLRDHV ALSRPCIIRN AVLDKSENKC PLHLTLDDLV DSDPTLSLVV DVTPDGQGDC LRLAQHQTLG CKHKENSQRT FVKPFEHRMS ISEFRSCLRA TRSGTTPSLE QIKNRIFQST ADVSCTVSEE AFNHGLPTEA VYYYSRQNDC LRSELYSLWQ KKLFPENFVW ASEAFGVPEP EAVNLWLGNE QAVSSMHKDH YENLFYVLSG EKVFTLCPPA DAPFLYEQNC SSGCFQYSAT EGWTISSDVH QDGTTLKIPW ISADVVEKEK SEVLDEFPLL TYTHPLEVHI RAGDLLYLPA LWFHRVTQSC ETVGINYWYD MKFDSPSWCY FHFLQSLIPN EAIQG
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