Gene PHATRDRAFT_27508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27508 
Symbol 
ID7201065 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp932336 
End bp933652 
Gene Length1317 bp 
Protein Length269 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180146 
Protein GI219118758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.258874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACTAACAGC CAGATTACTT ACCGTTACGG TAACAGGTTT GGCGTTGGTA GGCACACACA 
GGTATATCTG GCGCTACCCT GTTCTGGATA CTCTCTCTAT ACATTTACAA ATAGAAACAG
TATCGACTAG TCACTCTCCA AGTGTAGCAT GTTTCGCAAT CAATACGATA CGGATGTGAC
GGTGTGGAGT CCGGAAGGAC GACTCTTGCA GGTGCGTGCG TTTGTTTCGT TGGAATTAGA
GTTGAAATTA TTGGAGCTGA AAGAAACATT GGATGCCGTG GAGCTTACGG CTTTAGTTCA
ACGACTCTGG AGTCTTTGCA TTCTTGCCGG TCCCTTGCTT ACTTACTTGC GTATACAATG
CACACACTTT CACGCACGCA CTATTACTCA CTTCACACAC TGACTAACAA CGTTTCACGC
TCGACAGGTC GAGTACGCCA TGGAATCGGT CAAGCAAGGA TCCGCCTGCG TAGGACTACG
CTCGGACTCC ATTTGCGTTT TGGGTGCGCT CAAACGTTCC GTATCCGAGC TCAGTAGTCA
CCAGAAGAAG CTCTTGCACA TTGACGACCA CATTGCCGTT GGCATTGCCG GACTCACCGC
GGACGCGCGT TCACTCGCCA AGTCTCTCCA GAGCGAGTGT CTCAACCACA AGTACGTCTA
CGGGACGCCC ATCCCGCCGC ATCAGCTCAT GGCCGACCTC GCCGACAAGC ACCAGCGGAC
CACGCAAACC TACGTCCGTA GACCCTTTGG AGTTGGACTC CTCGTCGCCA GTGTCGATAC
CACCCGCCAA ACACCGCACT TGTACCAAAC CTGTCCCAGC GGGAACTTGT ACGAATTCGT
CGCATCCGCC ATTGGCGCAC GATCCCAATC CGCACGCACC TATCTCGAAA AACACGTGGA
CGACTTGGCC AACGCCACCC GCGATCAACT CATCGTACAC GCACTGCAAG CCCTCACCGG
ATGTGTCTCG GGAGACGATG AACTCACACC CGACAACGGG TCCATCGTTG TTGTTGGAAA
GGACATCCCC TACACCATGA TTGAAGGAGC CGACTTGCAA CCCTTTTTGG ACCAGTTGGA
AACACGAGAA ACGCCGGACG ACGATGATGA CGGCGACGCA CCCGACGAAG CGGAGAGTCC
ACTAGTGCCG GAGCCCCAAG CCATGGAAAC CTAACTGGTG TCGAATCATA CCCAGCTTTC
TACAGGGCCT CCGAACGATT CCGGTCGGTA ATTGGGGCGC GTTGCCGTTC CAGATAGGAT
TTCCAATTCA CACTTGCCTA CTAATGTAGG GTCATACCTA GCCTTGCAGT CTACACT
 
Protein sequence
MFRNQYDTDV TVWSPEGRLL QVEYAMESVK QGSACVGLRS DSICVLGALK RSVSELSSHQ 
KKLLHIDDHI AVGIAGLTAD ARSLAKSLQS ECLNHKYVYG TPIPPHQLMA DLADKHQRTT
QTYVRRPFGV GLLVASVDTT RQTPHLYQTC PSGNLYEFVA SAIGARSQSA RTYLEKHVDD
LANATRDQLI VHALQALTGC VSGDDELTPD NGSIVVVGKD IPYTMIEGAD LQPFLDQLET
RETPDDDDDG DAPDEAESPL VPEPQAMET