Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27508 |
Symbol | |
ID | 7201065 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 932336 |
End bp | 933652 |
Gene Length | 1317 bp |
Protein Length | 269 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180146 |
Protein GI | 219118758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.258874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACTAACAGC CAGATTACTT ACCGTTACGG TAACAGGTTT GGCGTTGGTA GGCACACACA GGTATATCTG GCGCTACCCT GTTCTGGATA CTCTCTCTAT ACATTTACAA ATAGAAACAG TATCGACTAG TCACTCTCCA AGTGTAGCAT GTTTCGCAAT CAATACGATA CGGATGTGAC GGTGTGGAGT CCGGAAGGAC GACTCTTGCA GGTGCGTGCG TTTGTTTCGT TGGAATTAGA GTTGAAATTA TTGGAGCTGA AAGAAACATT GGATGCCGTG GAGCTTACGG CTTTAGTTCA ACGACTCTGG AGTCTTTGCA TTCTTGCCGG TCCCTTGCTT ACTTACTTGC GTATACAATG CACACACTTT CACGCACGCA CTATTACTCA CTTCACACAC TGACTAACAA CGTTTCACGC TCGACAGGTC GAGTACGCCA TGGAATCGGT CAAGCAAGGA TCCGCCTGCG TAGGACTACG CTCGGACTCC ATTTGCGTTT TGGGTGCGCT CAAACGTTCC GTATCCGAGC TCAGTAGTCA CCAGAAGAAG CTCTTGCACA TTGACGACCA CATTGCCGTT GGCATTGCCG GACTCACCGC GGACGCGCGT TCACTCGCCA AGTCTCTCCA GAGCGAGTGT CTCAACCACA AGTACGTCTA CGGGACGCCC ATCCCGCCGC ATCAGCTCAT GGCCGACCTC GCCGACAAGC ACCAGCGGAC CACGCAAACC TACGTCCGTA GACCCTTTGG AGTTGGACTC CTCGTCGCCA GTGTCGATAC CACCCGCCAA ACACCGCACT TGTACCAAAC CTGTCCCAGC GGGAACTTGT ACGAATTCGT CGCATCCGCC ATTGGCGCAC GATCCCAATC CGCACGCACC TATCTCGAAA AACACGTGGA CGACTTGGCC AACGCCACCC GCGATCAACT CATCGTACAC GCACTGCAAG CCCTCACCGG ATGTGTCTCG GGAGACGATG AACTCACACC CGACAACGGG TCCATCGTTG TTGTTGGAAA GGACATCCCC TACACCATGA TTGAAGGAGC CGACTTGCAA CCCTTTTTGG ACCAGTTGGA AACACGAGAA ACGCCGGACG ACGATGATGA CGGCGACGCA CCCGACGAAG CGGAGAGTCC ACTAGTGCCG GAGCCCCAAG CCATGGAAAC CTAACTGGTG TCGAATCATA CCCAGCTTTC TACAGGGCCT CCGAACGATT CCGGTCGGTA ATTGGGGCGC GTTGCCGTTC CAGATAGGAT TTCCAATTCA CACTTGCCTA CTAATGTAGG GTCATACCTA GCCTTGCAGT CTACACT
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Protein sequence | MFRNQYDTDV TVWSPEGRLL QVEYAMESVK QGSACVGLRS DSICVLGALK RSVSELSSHQ KKLLHIDDHI AVGIAGLTAD ARSLAKSLQS ECLNHKYVYG TPIPPHQLMA DLADKHQRTT QTYVRRPFGV GLLVASVDTT RQTPHLYQTC PSGNLYEFVA SAIGARSQSA RTYLEKHVDD LANATRDQLI VHALQALTGC VSGDDELTPD NGSIVVVGKD IPYTMIEGAD LQPFLDQLET RETPDDDDDG DAPDEAESPL VPEPQAMET
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