Gene PHATRDRAFT_27385 details

Gene Information

• Locus tag: PHATRDRAFT_27385
• ID: 7201101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 492320
• End bp: 494492
• Gene Length: 2173 bp
• Protein Length: 697 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180248
• Protein GI: 219118963

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.648257
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATTTACAAAA CTCTCGTCGC TGTTTTTGGA ATACACTCTT CCTTTTCCCA TACTATAAGG 
TCATGTCCGA TAGAGAAACG AGCGGCACGA TGGATGCGGA GTACTCGACC GTGGCACTGA 
AAGGGCGGGA GTTGGAATGG GCCGTCAACT CGCCCGAACT CTTGGCTTCC CACAAGGCCG 
TGAACGGCTC CATTATTCGC ACTCGTTTTC CGCCCGAGCC TAACGGCTAC CTCCATATCG 
GACACGCCAA GTCGATGAAC ATGAACTTTC GTCTCGCGTT CGACAAGCTT GGTGTCCCGG 
AAGCACACCG TCGTACGATT TTTCGCTACG ACGATACCAA CCCGGAAGCC GAATCCGCCG 
AGTACATTGA CAGTTTGCGT CGAGATGTGG CTTGGCTAGG ATGGACACCG GAACGAACGA 
CGTACAGCTC GGACAACTTT CAGCAACTGC ACGACTACGC CGTTGTTCTT ATCCGAAAGG 
GACTCGCGTA CGTGTGTGAC ATGACCAAGG CCGAAATGGA GATCCAACGG GAACTCGCTA 
TGAAACGAGC CAACGCCCGG AATACCGGCA AAGACCCCGA CGTGGAATGT CCCATTCCAA 
GTGAAGACAT TCTACCTGGA CGCAATCGGA ACACTTCTGT GGATCGCAAT TTAGAATTGT 
TTGAAAAAAT GAAACTCGGA TTCTTCAATG AAGGCTCCTA CACACTCCGG TTGAAAATGG 
ATCTCGAAAG CTCCAATCCG AACATGTACG ATTTAGTCGC CTACCGGATC AAGTACACTG 
CGCACCCGCA CGCCGGTTCT GGTTGGTGCA TTTACCCCAG TTACGATTGG ACACACGGCA 
CCTGCGACAG TTTGGAACAT ATTGATTACA GTATTTGTAC ACTCGAGTTC GAGACTCGCC 
GTGAACCATA CTTTTGGATT CTGTGGGCCC TCGACCTATA CCGGCCGAAC GTGTACGAAA 
TGTCCCGTTT GAACTTGCAG TATACCGTTT TGTCGAAGCG TCGACTCATT AAGCTAGTCG 
AGAAGGGCTG GGTTCGGGGT TGGGACGACC CCCGAATGCC TACTGTATCT GGTCTACGAC 
GTAGAGGCTA CACGGCCCAT ATTCTCAACT CCTTTTGCTC CGATGTGGGC GCGTCTCGAG 
CAAGTAACGT GGTAGAAATT ACCAAACTGC AACAAACGGC TCGTGTTAAT CTTTCTGACT 
TATCACGACG AGTCATGGCG GCGTTGGAGC CCATTGAAGT TGTTTTGACG AATTTCGGTA 
CAGAAACGGC CCAGGATGCA ACCCTGACGT TCGAAGTGCA AAACAGTCCA ACCGATGTGA 
GCCTCGGATT TCACACGGTT ACATTGACGC CTACAATATA CCTGGATTCG GCAGATTTCC 
GATTGGAAGA TTCACCGCAG TATTACGGGC TCGCGCCGAA CAAAGCCGTT GGTCTCAAGT 
ATTACGGAGG CAATCTTGTT TGCGAAAAAG TCATTCAAGA CAAAGACGGA AACGTTGTCC 
AATTGGAAGG CCGTCTCGAC AAATCAGAAA ATCGGGAGAA ACCCAAGACA TACTTGTCTT 
GGGTCCCATC GGACGGCATA CGCTGCGAAG TCCGTGTCTA CAACGAACTC TTTACCGTCC 
CGGAACCTTC GGATTTGTGG GAAGATGAAG TCAATACGGA ATCGGAAATT GTCCATCAAC 
AAGCAATTGT CGATCCTTCC ATTCGCGACG TTGTGTGCGT CCACGACATT GACAAGTGGA 
AGTCGAATGT TTCGTTGCAG TTCGAACGCC TCGGCTACTT TGTCGTTGAC TACGAAACTA 
CCTACAATGG CGCCACCAAC GAGGGCCATT TGATATTCAA CCGCACCGTC ACTCTTAAGG 
AGGAAGTCTT CAAGAAAAAG CTTACCAAAG AGGAAGAAGA CAAGATCACA GCGCGCAAGG 
CTCAGACCAA GAACGATCTG GAAGCCAAGG GTATACGTAT GCAAATTGAT GCGTTGAATT 
TGTTTAAGGA GGCCGAGGAG TACCGAGGCA AGTACAGTAA GTACGATGCG GGAACCGGTG 
TACCGACGCA CGAGGTTGAC GGCACGGAAT TGACCAAGTC CATGATGAAG AAACTGGCCA 
AGGAGCAGGT CAAGCATAAA AAGCAGCAAC TAGCGTGGAA CAAGAATAAC AAATAGACAC 
GAGGTCAACC AAT 

 

Protein sequence

MSDRETSGTM DAEYSTVALK GRELEWAVNS PELLASHKAV NGSIIRTRFP PEPNGYLHIG 
HAKSMNMNFR LAFDKLGVPE AHRRTIFRYD DTNPEAESAE YIDSLRRDVA WLGWTPERTT 
YSSDNFQQLH DYAVVLIRKG LAYVCDMTKA EMEIQRELAM KRANARNTGK DPDVECPIPS 
EDILPGRNRN TSVDRNLELF EKMKLGFFNE GSYTLRLKMD LESSNPNMYD LVAYRIKYTA 
HPHAGSGWCI YPSYDWTHGT CDSLEHIDYS ICTLEFETRR EPYFWILWAL DLYRPNVYEM 
SRLNLQYTVL SKRRLIKLVE KGWVRGWDDP RMPTVSGLRR RGYTAHILNS FCSDVGASRA 
SNVVEITKLQ QTARVNLSDL SRRVMAALEP IEVVLTNFGT ETAQDATLTF EVQNSPTDVS 
LGFHTVTLTP TIYLDSADFR LEDSPQYYGL APNKAVGLKY YGGNLVCEKV IQDKDGNVVQ 
LEGRLDKSEN REKPKTYLSW VPSDGIRCEV RVYNELFTVP EPSDLWEDEV NTESEIVHQQ 
AIVDPSIRDV VCVHDIDKWK SNVSLQFERL GYFVVDYETT YNGATNEGHL IFNRTVTLKE 
EVFKKKLTKE EEDKITARKA QTKNDLEAKG IRMQIDALNL FKEAEEYRGK YSKYDAGTGV 
PTHEVDGTEL TKSMMKKLAK EQVKHKKQQL AWNKNNK