Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27282 |
Symbol | |
ID | 7200753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 12543 |
End bp | 13160 |
Gene Length | 618 bp |
Protein Length | 171 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180157 |
Protein GI | 219118781 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAACGCTCC CGACCTTTCG GGACAGCAGC GGCTCTTACA AGAACAAGAC GAAGCCCAAG AAATGGAAGA TGTTGATGAC CGCAAGGCCG AGTACACGTA CGAAGAACTC CTGGATCGGG TCGTGGATTT GCTGCAAGCC AACAATCCAG ACTTGGTTGA AAAGAAGCGG ACCCGCATCA AGCCTCCGCA ACTCCAGCTG TTGTCCAGCA AGAAGACTCT CTGGGTTAAC TACCAAGAGA TCTGCTCTAT GATGCAGCGC GATCCTCTGC ATGTTTACCA ATTCTTCATG GCAGAACTTG GGACCGAAGG TTCCATGGAC GGAAATCAGC GTCTCATTAT TCGAGGCAAG TACCTCTCCA AGTACATTGA AAGTCTACTG CGGAAATACG TCATCGAATA CGTGACGTGC GAAATGTGCC GTTCGCCCAA TACTGATCTC GTCAAAAATC AAGCCTCTCG TCTCTACTTT TGTACCTGCC GCGACTGCGG GAGCTCCCGA TCCGTAGCCC CCATTCGGTC CGGGTACCAC GCCACCTCTC GCGCCGATCG TCGGGCTGCC CGAAACGCCA AGGGTTAACA AATCGAAACG CAACTGTAAC CAAGGGCTAT TTCAATTC
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Protein sequence | MEDVDDRKAE YTYEELLDRV VDLLQANNPD LVEKKRTRIK PPQLQLLSSK KTLWVNYQEI CSMMQRDPLH VYQFFMAELG TEGSMDGNQR LIIRGKYLSK YIESLLRKYV IEYVTCEMCR SPNTDLVKNQ ASRLYFCTCR DCGSSRSVAP IRSGYHATSR ADRRAARNAK G
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