| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20335 |
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| Symbol | |
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| ID | 7201027 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 772746 |
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| End bp | 775037 |
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| Gene Length | 2292 bp |
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| Protein Length | 665 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180115 |
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| Protein GI | 219118695 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGACAATGGC CGTCGCTTGT GTCAAGGCAA GAGCAAGTGT ATATGAATCT TTCTACGTCC
CATTGACTAC TGATCTATTT ACTAAGCCCA TAATAAGTTT CTTTGGAAAT GAAGCTCTTT
TCTGAAACAG CCAAAAAGAA ACGACACCGC TCCGATTCCA TTGATTCATT AGCGAATTTC
CGGCAGAATC TCCCTGTTTA CGCATATCGC ACGGAGCTAC TTCGAGCAAT ACGGAGTCCC
AAAATTGTCC TTGTTACTGC TTCAACTGGT AGCGGCAAGT CGACCCAGAT ACCGGCCTAC
TTGATCGACA GCGAGCACGT CATGGCCGTC ACACAGCCTC GACGAGTTGC TGCCACTACC
CTCGCCCAAC GCGTGGCGCA CGAACACCAA GGCATTGTGG GACACCAAAT TGGCTATCGC
GTAAGATTTG ACGATTGCAC TCGCAGCGAT ACCCAACTTA CCTACGTGAC GGATGGTATG
CTCCTGCGAG AAGCCATGGT GGATCCACTC CTACGAAAAT ATTCGATCAT ATTTCTCGAC
GAAGCGCACG AGCGATCCTT ACAAACTGAT ATTTTGCTCG GTGTCGTGCA GCGTGCGCGC
AAATCACGAC AGCAGTCCTA CAGTAGGCGG CCATTGCAAA TCGTTGTCAT GTCGGCAACA
CTACAAGTCC AAACTTTTGA AGATTTTTTC GGTAAAGAAA ATGTTGTCCG TATTGAAATT
CCTGGGCGGC AATTTCCAGT GCAAATGCTG TATACTTCGG TACCCGCCGA AGATTATATG
GAAGCTACTT TGGCGACGAT ATTGCAAATC CACACCCATG AGGAAGCTGG AGATGTGCTA
GTCTTTCTAC CTGGACAGGA AGAAATCGAG GATTTGGCGA CGTTGCTAAG GTTGCAGCTA
CAGGAAGAGG AAGCCTCCAA ATGGACCGGG GATCATGTTG TCCCTTTCGC GCATCAGCAC
ACCAGGGGCA ATACCGTATC GCAACTGCTC GCGAATGGAG TTCTCATATG CCTCTTGTAT
GCAGCCTTAC CTCCGGAAGC ACAGCTTGCG GCTTTTGCCG AAAAGCCAGA AGGGTGTCGT
CGCAAAATAA TTCTCGCTAC CAACATTGCC GAAACGTCCG TTACATTGCC GGCGATTCGC
TACGTTGTAG ACACCGGTAA ACACAAACTC CGACAAATCC TAGCCACTGG TATGGACAGT
TTGACAGTCG AATCTGTCAG TCAAGCGCAA GCGGCCCAAC GCGCTGGACG AGCAGGCCGT
ATTGGACCTG GACTCTGTTT TCGACTATAC ACTGAAGACG CTTTCGAGCG CTTGGATCCC
GACAGTCTGC CTGAAATCCT TCGAGTCGGT TTGGCGCAAG TCATACTGCA ACTCAAGGGT
ATGGGAGTGC AAGATCCCAC TACGTTTGAT TTCGTCACTC CGCCCGACAC ATCCAGCTTG
GTTCGTGCCG CGAAACTGTT GTACGCCTTA GGGGCAGTCA ACGATGCCAT GGAGCTGACG
GACTACGGCA AAAAACTAGC CAAGTTACCG CTAGATCCTG TGTTCGGCCA CCTGCTTCTC
AAGAGTGCCG AGTACTCGTG CACAAGTGAG ATGTTGACGG CAGTGGCCGT CCTCTCTGCC
GAGAACGTCT TCTATCGACC GACAACCGGA GAAGTTATCG CCAAAGCGGC CGCTGCCCAC
CGTCGGTTTG CGAGCCACGA AGGGGATCTC CCTACCTTTC TCAATGTGTA CCAAGCCTGG
GAACGAGAGG CGTCGTACGT ACCTCCCACT TCTGGTGGTC GCCGAGCCCA AAAAAAGCTT
CTGCATACGA ACGGACAGCA TTCAAGAGTG TTGCATGGGG AATGGTGCCA GCGAAATTTT
GTTTCTGGAC GTTCCTTGGG ACGAGCTTAT CACGTACGAC AGCAACTTAG GTCTACGTGT
TTGAGGCCAG CGGAAAAGAA TGGGCTAGGG ATGGACGTGA ACGTCACTTG TGGAAAGGAT
CGAGAAAGTT TTCTAAAGTG TGCGGCGGCT GGACTTTTTT TGCAAGTGGC CTCCCGCACC
AAGGCAGAAA CGGAGATTGA TAGTCGGGGT CGATCGGGAA CTGTCGTCTC AACGCGAGGA
CGGTATCGAA CGAAAATAGG TAACGAAACA GTTTCCATCC ATCCGACGTC TACCATGTTT
GGAAGACATC CTGCACCAGC TTGTGTAGTG TTTACGGAAT TAGTCACGAC GAAAAAGACG
TACATTCGCG GAGTGACACA AATCCGGGAA GAATGGCTAC ACGAGGTTGC TCCTGTCTTC
TATCCAAAGT AA
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| Protein sequence | MKLFSETAKK KRHRSDSIDS LANFRQNLPV YAYRTELLRA IRSPKIVLVT ASTGSGKSTQ
IPAYLIDSEH VMAVTQPRRV AATTLAQRVA HEHQGIVGHQ IGYRVRFDDC TRSDTQLTYV
TDGMLLREAM VDPLLRKYSI IFLDEAHERS LQTDILLGVV QRARKSRQQS YSRRPLQIVV
MSATLQVQTF EDFFGKENVV RIEIPGRQFP VQMLYTSVPA EDYMEATLAT ILQIHTHEEA
GDVLVFLPGQ EEIEDLATLL RGNTVSQLLA NGVLICLLYA ALPPEAQLAA FAEKPEGCRR
KIILATNIAE TSVTLPAIRY VVDTGKHKLR QILATGMDSL TVESVSQAQA AQRAGRAGRI
GPGLCFRLYT EDAFERLDPD SLPEILRVGL AQVILQLKGM GVQDPTTFDF VTPPDTSSLV
RAAKLLYALG AVNDAMELTD YGKKLAKLPL DPVFGHLLLK SAEYSCTSEM LTAVAVLSAE
NVFYRPTTGE VIAKAAAAHR RFASHEGDLP TFLNVYQAWE REASYHSRVL HGEWCQRNFV
SGRSLGRAYH VRQQLRSTCL RPAEKNGLGM DVNVTCGKDR ESFLKCAAAG LFLQVASRTK
AETEIDSRGN ETVSIHPTST MFGRHPAPAC VVFTELVTTK KTYIRGVTQI REEWLHEVAP
VFYPK
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