| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20310 |
|---|
| Symbol | |
|---|
| ID | 7201011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 698094 |
|---|
| End bp | 699558 |
|---|
| Gene Length | 1465 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180296 |
|---|
| Protein GI | 219119059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.130421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAGTTCGCAA GTCCGACCAA GGAAAGACCG TATCGTGTCA TTGATCTTGG GCGAGAATTA
TCGATACCAT TTGTCAGCCT TCGTAGATTT CAGACTCGTG CTGTTGTGTT TGCCACTCAA
TCATTATCAC TGTTTGCTCT TGCTTACAAT TAGGCTGGTC ATGACTTTTC AATCCGTAGT
CTTGAAGGCA GCTCGAGCTA GATGCTTCTC TTCGCACTTA CAGTTAGCGA GAGCTACTTC
ATCGTGCCGT TGTTCCTTGA GCACCTCGGC TTCCGACGAT TTGGCCACAC GGCATGCCGT
CGCTCCGCTG CACGCTCCCG TCACGGCTCT TACCGAAGAC GAAAGCATGA TTCGCGACGT
GGCACGCCAA TGGGCGAACG ATGGGCTCCG TCCGGTGGTC CGGAAAATGG ATAGGGAAGG
ATCTCTCGAT CCAGATATTC TCTCTAGTTT GTTTGCACAA GGATTCATGG GCATGGAAAT
ACCACCCGAG CACGGGGGAA GTGGTCTTTC GTTTACGTCC GCATGCTTGG TCGTAGAAGA
AATATCACGG GTCGATCCGT CCGTTGCCAT CTTGGTGGAC ATTCACAACA CGCTCACGAA
CAATGCGATT CGGTTTTGGG GATCCGAATC TTTGCGCAAT ACGTGGCTGC CGCGACTCGC
AACGGACACG GTAAGCTCCT TCTGTCTAAG CGAGGCAGAA AGTGGGAGTG ACGCATTCGC
CCTGAAAACA ACTGCGATAC CAACGTCTTC TTCGGAATAC GTTTTGAACG GCACAAAATT
GTGGATTTCC AATGCTGCCC AGGCCGGTGT CTTTCTTGTC TTTGCCAATG CCAATCCAGC
TGCTGGCTAC AAAGGTATAA CAGCTTTCAT GGTGGATGCG AAAACGGAAG GAATAAGCGT
TGGGCCGCCC GAATCTAAGC TAGGTTTGCG TGCGTCGTCC ACCTGTCCGA TTACTTTTGA
CGACGTCAAA GTTACTACGG ATGATATATT GGGCCAAGTC GGAATGGGTT ACAAGTACTG
TATCAATATA TTAAACGAAG GCCGCATTGG TATCGCATGT CAGCAAATTG GAATTGCCAA
AGGATGTTTG GATATTGTCA TGCCATATTT GAAAGAGCGG CAACAGTTTG GTAGAGCAAT
TGCCGATTTT CAAGGCGTCC AATTTCAAGT TGCCATGGCC GCGACGGAAC TACACGCCGC
CGAAGTCATG ACATACAACG CGTGTCGTTT GAAGGAGGCA AATTTACCGT TTGTCAAGGA
GGCAAGTATG GCCAAACTCT ACTCGAGCAA AGTGTCTGAG AAGGTTGCAA GCTTGACCAT
TGAACTTTTG GGTGGCATTG GTTTTACACA AGATTTGTTG GCCGAAAAGT TTTATCGCGA
TTGCAAAGTT GGTTCGATTT ATGAAGGCAC TTCCAATATG CAGTTGCAAA CCATTGCCAA
ACTCTTGTTT GCCGATTTCA AGTAG
|
|---|
| Protein sequence | MTFQSVVLKA ARARCFSSHL QLARATSSCR CSLSTSASDD LATRHAVAPL HAPVTALTED
ESMIRDVARQ WANDGLRPVV RKMDREGSLD PDILSSLFAQ GFMGMEIPPE HGGSGLSFTS
ACLVVEEISR VDPSVAILVD IHNTLTNNAI RFWGSESLRN TWLPRLATDT VSSFCLSEAE
SGSDAFALKT TAIPTSSSEY VLNGTKLWIS NAAQAGVFLV FANANPAAGY KGITAFMVDA
KTEGISVGPP ESKLGLRASS TCPITFDDVK VTTDDILGQV GMGYKYCINI LNEGRIGIAC
QQIGIAKGCL DIVMPYLKER QQFGRAIADF QGVQFQVAMA ATELHAAEVM TYNACRLKEA
NLPFVKEASM AKLYSSKVSE KVASLTIELL GGIGFTQDLL AEKFYRDCKV GSIYEGTSNM
QLQTIAKLLF ADFK
|
|---|
| |