Gene PHATRDRAFT_20308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20308 
Symbol 
ID7201010 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand+ 
Start bp696182 
End bp696890 
Gene Length709 bp 
Protein Length148 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180098 
Protein GI219118660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0878511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CACCGGCCGG TGAAGTCGTC ATCGTCCCTC GCAACTTCAA GCTGCTGGAG 
GAGCTGGAAA GATCGGAGAA GGGCCACGGT GACATGGCCA TTTCCTTTGG TTTGGTCGAT 
ACTTCCGACA CGTTCCTGTC GGACTGGAAT GGTGGGATTC TGGGGCCTCC GGGGGTACGT 
GTCAGAGGAC TTTCAAAATC CTTTCCGGCT ACCGGTTGAG ACATAGTCAA CGTTTGGCGA 
TATACTTTCA AATTGAGTTG TGTAGCTCAC CTCTTTCGAC GCGTGTTCCT TGTTCACAGA 
CACAATATGC GGACCGATTC TATGAAGTGC GCATTCACTG TCCCGACATT TACCCCGCCT 
CCCCACCGAA CATTCGCTTC GTCAGCAAAA TCAATATGAA CTGCGTGGAT AGCAAGACGG 
GTGTCGTGAG CGACAAGAAA CTGCCCGCCA TGCGCAATTG GAATCGCAAC ATGGGCATTG 
AGCAGGTCTT GCAGTCGATT AGGATGGAGA TGTGTTCCGA CGCCAATCGT AGACTTCGTC 
AGCCGGCGGA CGGGACGACA TTCTAAAAAT TATCGAAATC TACCAGAGTC GAGCCCTCTC 
GCCCCATTTC CCTTCCTTTC CCACTGAATG ACGGCGTTCT TACAGTTCGA CCGTACAAAC 
ACTATAAAAC ACTATTGTCA AACCCGATGT TGCGCTACAC GGCGGATAT
 
Protein sequence
MKKTPAGEVV IVPRNFKLLE ELERSEKGHG DMAISFGLVD TSDTFLSDWN GGILGPPGVR 
TQYADRFYEV RIHCPDIYPA SPPNIRFVSK INMNCVDSKT GVVSDKKLPA MRNWNRNMGI 
EQVLQSIRME MCSDANRRLR QPADGTTF