Gene PHATRDRAFT_12436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12436 
Symbol 
ID7201120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp571714 
End bp572250 
Gene Length537 bp 
Protein Length179 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180078 
Protein GI219118618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATACTCGTCG TCGGAGGCCC CGGATCCGGC AAAGGTTTGC TCAGTAAGCG CCTGGAAAAG 
GAATGCCACG TCGTCCATCT ATCCTCCGGG GAACTCTTGC GTTCCGAAGT AGCACAGGAT
ACCGCGCTCG GTCGACAAGT CCGGGATATT ATGGACCGCG GCGAACTCGT CTCCTCCGCA
ATTATGGTCG CCCTCATGAA GAAACGCATG CGCGATCATC CCGGGAAACG CGTTCTACTG
GACGGCTTTC CCCGTTCGCT GGAAAACGCC CACGATCTCG TCACGCTCTG CGGCAGACCC
GAACTCGCTC TGCACTTGGA ATGCGACGAT ACCATACTGC TCGAACGCAT ACTCCAACGC
GGCGCCGATA GCGCCCCGGA AGAACGGCGC GCCGACGACA ACTTTCAAAC CGCACTCCAA
CGACTACGGA CTTACCACGC CTTTCACAAT TCCACCATAC ACTGGTTGAG GGAACAACAC
GTACCCGTCG TCAATTTGGA TTGCTCCGGT ACCGCCGAGT CGGTATGGCA ACAACTA
 
Protein sequence
ILVVGGPGSG KGLLSKRLEK ECHVVHLSSG ELLRSEVAQD TALGRQVRDI MDRGELVSSA 
IMVALMKKRM RDHPGKRVLL DGFPRSLENA HDLVTLCGRP ELALHLECDD TILLERILQR
GADSAPEERR ADDNFQTALQ RLRTYHAFHN STIHWLREQH VPVVNLDCSG TAESVWQQL